Protein Alignment Sox21a and sox11a

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_571411.1
• Gene: sox11a / 30602
• ZFINID: ZDB-GENE-980526-395
• Length: 354
• Species: Danio rerio
• Alignment Length: 314
• Identity: 90/314 - (28%)
• Similarity: 131/314 - (41%)
• Gaps: 91/314 - (28%)

  Fly   120 HIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMKE 184
            |||||||||||||:.:|||:.:.:|.|||:|||||||..||:|.:.:|.|||.||:|||..||.:
Zfish    40 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMAD 104

  Fly   185 HPDYKYRPRRKPKTLNKSPVPGGGGGGGGGGANGGVNAGGAGNSGPSGPGSVGSPKDMQPQLSPL 249
            :|||||||::||| |:.|                         |.||.|    ||:... :.|..
Zfish   105 YPDYKYRPKKKPK-LDSS-------------------------SKPSAP----SPEKCS-KTSKS 138

  Fly   250 GQSLPHLHGHPHQSPYQSHPHHPHPHPHHVQLAAATLSAKYGFGSPLELSLPRLPNAFP------ 308
            .:..|.|..:...|...||.:                ..:|.|.|........:.:.|.
Zfish   139 SKKCPKLKANKTGSKSSSHGY----------------GDEYAFKSTKVSKTVHIKSEFTDEDDDD 187

  Fly   309 ---------------------GLAHYPLDPTLALDLQARLQAMYA----GSIYHPWRYLPLISPE 348
                                 .:|..|..|||:...::...:||.    ..:|:.::.:...|..
Zfish   188 DSEEDSRVRVKEEEEDPIRAYNVAKVPASPTLSSSTESEGASMYEEVRNNRLYYNFKNITKQSTM 252

  Fly   349 TPPSPPSSSGTGISSYGCVKSEKSSPNAVVASAASPPNIIXPTPLRFGAGTSSS 402
            .|.|...:|...:|:     |..||.:|        .::: ...|.|.:...||
Zfish   253 YPASVSPASSRSVST-----SSSSSEDA--------DDLLFDFSLNFASSAQSS 293

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	50/77 (65%)
sox11a	NP_571411.1	HMG-box_SF	30..107	CDD:469606	41/66 (62%)