Protein Alignment Sox21a and sox21a

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_571361.1
• Gene: sox21a / 30543
• ZFINID: ZDB-GENE-990715-6
• Length: 239
• Species: Danio rerio
• Alignment Length: 257
• Identity: 111/257 - (43%)
• Similarity: 127/257 - (49%)
• Gaps: 64/257 - (24%)

  Fly   119 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMK 183
            ||:||||||||||||.||||||.|||||||||||||||.|||||::.:|||||||||||||:|||
Zfish     6 DHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDEAKRLRAVHMK 70

  Fly   184 EHPDYKYRPRRKPKTLNKSPVPGGGGGGGGGGANGGVNAG------GAGNSGPSGPGSVGSPKDM 242
            ||||||||||||||.|.|.         .....|...|.|      .|..||.:...|:.:.|..
Zfish    71 EHPDYKYRPRRKPKNLIKK---------DRYHFNVTYNLGEGDPLKSARLSGDALSDSLSAEKTS 126

  Fly   243 QPQLSPLGQSLPHLHGHPH-----QSPYQSHPHHPHPHPHHVQLAAATLSAKYGFGSPLELSLPR 302
            ....:.......||..:|:     .|.....|  |.|.||:..|.       |..|.|
Zfish   127 VAAAATRVFFSHHLSANPYPFLDLNSKISELP--PAPFPHYSVLG-------YPSGLP------- 175

  Fly   303 LPNAFPGL--------AHYPLDPTLALDLQARLQAMYAGSIYHPWRYLPLISPETPPSPPSS 356
               ||||:        ||    |:             |||..|...|..|..|.:.|:.|||
Zfish   176 ---AFPGMGVLAGAPHAH----PS-------------AGSPGHMLPYNCLGWPGSGPAVPSS 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	69/78 (88%)
sox21a	NP_571361.1	HMG-box_SoxB	6..85	CDD:438790	69/78 (88%)