Protein Alignment Sox21a and Sox14

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_001100320.1
• Gene: Sox14 / 300954
• RGDID: 1309654
• Length: 240
• Species: Rattus norvegicus
• Alignment Length: 241
• Identity: 108/241 - (44%)
• Similarity: 120/241 - (49%)
• Gaps: 57/241 - (23%)

  Fly   119 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMK 183
            |||||||||||||||||||||||:||||||||||||||||||||:|.:|||:|||||||||.|||
  Rat     6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMK 70

  Fly   184 EHPDYKYRPRRKPKTLNKS-----PVPGGGGGGGGGGANGGVNAGGAGNSGP----------SGP 233
            ||||||||||||||.|.|.     |:|..|.......|...|.|.....|.|          |.|
  Rat    71 EHPDYKYRPRRKPKNLLKKDRYVFPLPYLGDTDPLKAAGLPVGASDGLLSAPEKARAFLPPASAP 135

  Fly   234 GSVGSPKDMQ-------------------PQLSPLGQ--------SLPHLHGHPHQSPYQSHPHH 271
            .|:..|....                   |..|.||.        |.|..|.|.|.||
  Rat   136 YSLLDPAQFSSSAIQKMGEVPHTLATSALPYASTLGYQNGAFGSLSCPSQHTHTHPSP------- 193

  Fly   272 PHPHPHHVQLAAATLSAKYGFGSPLELSLPRLPNAFPGLAHYPLDP 317
              .:|.:|.....|..:......|:...|      |||:....:||
  Rat   194 --TNPGYVVPCNCTAWSASTLQPPVAYIL------FPGMTKTGIDP 231

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	72/78 (92%)
Sox14	NP_001100320.1	HMG-box_SoxB	6..85	CDD:438790	72/78 (92%)
		SOXp	77..>118	CDD:463537	16/40 (40%)