Protein Alignment Sox21a and Sox21

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_808421.1
• Gene: Sox21 / 223227
• MGIID: 2654070
• Length: 276
• Species: Mus musculus
• Alignment Length: 290
• Identity: 114/290 - (39%)
• Similarity: 131/290 - (45%)
• Gaps: 92/290 - (31%)

  Fly   119 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMK 183
            ||:||||||||||||.|||||||:||||||||||||||||||||||.:|||||||||||||:|||
Mouse     6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMK 70

  Fly   184 EHPDYKYRPRRKPKTLNKS-----PVPGG-------------GGGGGGGGANGGV---------- 220
            ||||||||||||||||.|.     |||.|             .|.|...||.||:
Mouse    71 EHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGSVADAEHPALKAGAGLHAGAGGGLVPESLLANPE 135

  Fly   221 ---------------NAGGAGNSGPSGPGSVGSPKDMQPQLSPLGQSLPHLHGHPHQSPYQS--- 267
                           ....|..:..:...:.|||.    .|..||..:..:.......||.|
Mouse   136 KAAAAAAAAAARVFFPQSAAAAAAAAAAAAAGSPY----SLLDLGSKMAEISSSSSGLPYASSLG 196

  Fly   268 -------------------------HPH-HPHP-HPHHVQLAAATLSAKYGFGSPLELSLPRLPN 305
                                     |.| ||.| :|.::.....:.....|...||...|
Mouse   197 YPTAGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYMIPCNCSAWPSPGLQPPLAYIL----- 256

  Fly   306 AFPGLAHYPLDPTLALDLQARLQAMYAGSI 335
             .||:....|||         ..|.||.::
Mouse   257 -LPGMGKPQLDP---------YPAAYAAAL 276

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	72/78 (92%)
Sox21	NP_808421.1	HMG-box_SoxB	6..85	CDD:438790	72/78 (92%)
		SOXp	77..>95	CDD:463537	11/17 (65%)