Protein Alignment Sox21a and sox-4

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_001335567.1
• Gene: sox-4 / 182547
• WormBaseID: WBGene00015716
• Length: 260
• Species: Caenorhabditis elegans
• Alignment Length: 202
• Identity: 67/202 - (33%)
• Similarity: 99/202 - (49%)
• Gaps: 8/202 - (3%)

  Fly     7 LLHRSHSHSNGYTSSGSSNHSHSSS------LSPQLPGINLGLGMVGGLGMGMSVGVGSGSGNTT 65
            |.|...|..|.|:.:..:....::|      :||.:......|.::..:.....|....|..:.:
 Worm     2 LSHPYASAFNLYSQARKTTPIAAASSVSCPIVSPNMDATQKLLAIMATVKSFEQVNDSDGLSSPS 66

  Fly    66 PPPMPPADLAVPPAAPTPVAPKMHQHTHHHGNSHHNAPTSHSNSNTGSHHNSHDHIKRPMNAFMV 130
            .|..|.....|..:........:..| :.:|||..:...|...|.:.........||||||||||
 Worm    67 SPESPTESPNVISSVQASTIADIIGH-YVNGNSIKDVVNSSQKSASQPRTAREPRIKRPMNAFMV 130

  Fly   131 WSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRK 195
            ||:.:|:::|....|.|||:|||.|||||:.:.|.:|.||::.||:||..|...||||.|||||:
 Worm   131 WSQQRRQQIAATGQKFHNSDISKMLGAEWRKMEEHEKVPFVERAKQLREEHFNAHPDYVYRPRRR 195

  Fly   196 PKTLNKS 202
             |.:.||
 Worm   196 -KRVEKS 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	44/78 (56%)
sox-4	NP_001335567.1	HMG-box_SOX	120..194	CDD:438820	42/73 (58%)