Protein Alignment Sox21a and sox-2

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_741836.1
• Gene: sox-2 / 181002
• WormBaseID: WBGene00004949
• Length: 283
• Species: Caenorhabditis elegans
• Alignment Length: 135
• Identity: 80/135 - (59%)
• Similarity: 98/135 - (72%)
• Gaps: 10/135 - (7%)

  Fly    76 VPPAAPTPVAPKMHQHTHHHGNSHHNAPTSHSNSNTGSHHNSHDHIKRPMNAFMVWSRGQRRKMA 140
            :||.:.|.:.|:...      :...|.|.|..::......|. |.:|||||||||||||||:|||
 Worm    22 MPPTSSTNLLPQSMP------DDLSNGPDSPDSTGKDGKKND-DRVKRPMNAFMVWSRGQRKKMA 79

  Fly   141 QDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNK---S 202
            .:||||||||||||||.|||:|:|.:|||||||||||||:|||||||||||||||.|::||   :
 Worm    80 LENPKMHNSEISKRLGTEWKMLSEQEKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKSINKKNGA 144

  Fly   203 PVPGG 207
            |:|.|
 Worm   145 PIPFG 149

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	66/78 (85%)
sox-2	NP_741836.1	HMG-box_SoxB	58..137	CDD:438790	66/78 (85%)