Protein Alignment Sox21a and sox32

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_571926.1
• Gene: sox32 / 116990
• ZFINID: ZDB-GENE-011026-1
• Length: 307
• Species: Danio rerio
• Alignment Length: 230
• Identity: 58/230 - (25%)
• Similarity: 103/230 - (44%)
• Gaps: 38/230 - (16%)

  Fly    89 HQHTHHHGNSHHNAPTSHSNSNTGSHHNS---------HDHIKRPMNAFMVWSRGQRRKMAQDNP 144
            ||:......:|..|....|..:.||..:.         ...::||:|||::|::.:||::||.||
Zfish    29 HQNDEQRRTAHCPASGPLSPVSVGSESSCSSPEAKAPVETRVRRPLNAFIIWTKEERRRLAQLNP 93

  Fly   145 KMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKSPVPGGGG 209
            .:.|:::||.||..||.::...|||::.||:|||..|..::|:|||||||:......|.:|..
Zfish    94 DLENTDLSKILGKTWKAMSLADKRPYMQEAERLRIQHTIDYPNYKYRPRRRKCNKRSSKMPSS-- 156

  Fly   210 GGGGGGANGGVNAGGAGNSGPSGPGSVGSPK---DMQPQLSPLGQSLPHLHGHPHQSPYQSHPHH 271
                                    .:|.||.   |:...........|:...:.::.|:......
Zfish   157 ------------------------ENVSSPNATFDLSYMFQGQAPQRPYNQINSYRLPHNGFSFE 197

  Fly   272 PHPHPHHVQLAAATLSAKYGFGSPLELSLPRLPNA 306
            .|...:|.:..:::.:..:|..:.:.||...||.:
Zfish   198 NHSSSYHFEATSSSGNVFHGGATSMNLSNVHLPRS 232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	36/78 (46%)
sox32	NP_571926.1	HMG-box_SoxF	69..144	CDD:438841	35/74 (47%)