Protein Alignment Sox21a and sox12

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: XP_031750240.1
• Gene: sox12 / 116407953
• XenbaseID: XB-GENE-483252
• Length: 244
• Species: Xenopus tropicalis
• Alignment Length: 200
• Identity: 67/200 - (33%)
• Similarity: 86/200 - (43%)
• Gaps: 56/200 - (28%)

  Fly   117 SHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALH 181
            |:.|||||||||||||:.:|||:....|.|||::||:.||..||||.:..|.|::.||:|||..|
 Frog    27 SNGHIKRPMNAFMVWSQIERRKLMSLCPNMHNADISRSLGQRWKLLLDTDKIPYVREAERLRLKH 91

  Fly   182 MKEHPDYKYRPRRK---------------PKTLNKSPVPGGGGGGGGGGANGGVNAGGAG----- 226
            |.::|:|||||||:               |.|....|.|.......|.....|....|.|
 Frog    92 MADYPNYKYRPRRRRRNPESRTRARLPCSPATCQSDPSPCQSQMDTGSSMQWGETCSGWGGDQVA 156

  Fly   227 ---------------------NSGPSGP-----------GSVGSPKDMQPQLSPLGQSLPHLHGH 259
                                 .|.|:.|           ||:..|.|.:    .||.|..|....
 Frog   157 QSEETQIRESSARSPEVPTHTKSVPTSPDSAEEQEGAEGGSLVIPLDKE----VLGHSGSHFEFP 217

  Fly   260 PHQSP 264
            .|.:|
 Frog   218 DHCTP 222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	46/93 (49%)
sox12	XP_031750240.1	HMG-box_SoxC	30..100	CDD:438838	39/69 (57%)