Protein Alignment Sox21a and LOC103910042

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: XP_009296780.3
• Gene: LOC103910042 / 103910042
• -ID: -
• Length: 212
• Species: Danio rerio
• Alignment Length: 237
• Identity: 95/237 - (40%)
• Similarity: 117/237 - (49%)
• Gaps: 70/237 - (29%)

  Fly   119 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMK 183
            :||||||||||||||||||:||.:||||||||||||||||||.|::.:|||:|||||||||.||:
Zfish    12 EHIKRPMNAFMVWSRGQRRQMALENPKMHNSEISKRLGAEWKRLSDSEKRPYIDEAKRLRAQHMR 76

  Fly   184 EHPDYKYRPRRKPKTLNKSPVPGGGGGGGGGGANGGVNAGGAGNSGPSGPGSVGSPKDMQPQLSP 248
            ||||||||||||||.|.:                                      |||...|..
Zfish    77 EHPDYKYRPRRKPKGLLR--------------------------------------KDMVLSLPL 103

  Fly   249 LGQSLPHLHGHPHQSPYQSHPHHPHPHPHHVQLAAATLSA----KYGFGSPLELSLPRLPNAFPG 309
            :|||       ..:.|...|..........|:.:.:|.:.    |.||.:             ..
Zfish   104 VGQS-------DSEKPRDVHSSSAAAQHQFVEQSRSTCTVFPHEKLGFST-------------GS 148

  Fly   310 LAHYPLDPTLALDLQARLQAMYAGSIYHPWRYLPL-ISPETP 350
            ||..|     ||..|...::  |||:..|.::... :||..|
Zfish   149 LAFSP-----ALGYQGGHRS--AGSLGCPGQFAHTHLSPANP 183

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	66/78 (85%)
LOC103910042	XP_009296780.3	None