Protein Alignment Sox21a and sox21

DIOPT Version :10

• Sequence 1: NP_001261827.1
• Gene: Sox21a / 39567
• FlyBaseID: FBgn0036411
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: XP_002939326.1
• Gene: sox21 / 100038091
• XenbaseID: XB-GENE-486445
• Length: 271
• Species: Xenopus tropicalis
• Alignment Length: 280
• Identity: 114/280 - (40%)
• Similarity: 134/280 - (47%)
• Gaps: 77/280 - (27%)

  Fly   119 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMK 183
            ||:||||||||||||.|||||||:||||||||||||||||||||||.:|||||||||||||:|||
 Frog     6 DHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTEAEKRPFIDEAKRLRAMHMK 70

  Fly   184 EHPDYKYRPRRKPKTLNKS-----PVPGGGGGGGGGGANGGVNAGG------------------- 224
            ||||||||||||||||.|.     |:|.|..|...|....|::..|
 Frog    71 EHPDYKYRPRRKPKTLLKKDKFAFPMPYGFTGDHDGLKVAGLHGAGALTDSLLSNPEKAAAAAAA 135

  Fly   225 -------------------AGNSGPSGPGSVGSPKDMQPQLSPLGQSLPHLH--GHPHQS----- 263
                               |...|.:.|.|:........:::....|||:..  |:|..|
 Frog   136 AAARVFFPPSAAAAAAAAAAAAGGANHPYSLFDLSSKMAEITSSSSSLPYTSSIGYPQASGGAFP 200

  Fly   264 -----------PYQSHPH-HPHP-HPHHVQLAAATLSAKYGFGSPLELSLPRLPNAFPGLAHYPL 315
                       ....|.| ||.| :|.::.....|.....|...||...|      |||:....|
 Frog   201 GVAAAAAAAAAAGGGHTHSHPSPGNPGYMIPCNCTGWPSPGLQPPLAYIL------FPGMGKPQL 259

  Fly   316 DPTLALDLQARLQAMYAGSI 335
            ||..|        |.||.::
 Frog   260 DPYPA--------AAYAAAL 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox21a	NP_001261827.1	HMG-box_SoxB	119..198	CDD:438790	72/78 (92%)
sox21	XP_002939326.1	HMG-box_SoxB	6..85	CDD:438790	72/78 (92%)
		SOXp	77..>95	CDD:463537	11/17 (65%)