DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nprl3 and nprl-3

DIOPT Version :10

Sequence 1:NP_648680.2 Gene:Nprl3 / 39550 FlyBaseID:FBgn0036397 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_501396.1 Gene:nprl-3 / 185331 WormBaseID:WBGene00018072 Length:511 Species:Caenorhabditis elegans


Alignment Length:615 Identity:149/615 - (24%)
Similarity:253/615 - (41%) Gaps:146/615 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AVILVYFDSKGDRLLYRYPYQTLGQTEVANDEQRKSRKRNP-YAVANTDDLLQTPTH-LGAAKSQ 71
            ||:.......|::::..||::.......:.|.|..|  .|| ..|......::.|:: .|...::
 Worm    16 AVMCFLTGQSGEKIVSIYPHRKPATKAPSKDPQPSS--SNPGQCVKPVLTSVKDPSYGFGRVDTE 78

  Fly    72 GQLQ-GFADEVLSALFAVKPQLCNQKFELKLNDVRFVSHPTLIPQKEQRSGPMAKQQMLINIVFA 135
            ..:. |    :|:.:|..:...||..|::|:|:.|||::    |:..:..|.....|  |:||||
 Worm    79 FDMSLG----MLAYVFKTQEIACNDGFDMKINNQRFVAY----PKTWKARGESTNYQ--ISIVFA 133

  Fly   136 LHAQASYSIVKCYHELSKRLGLALKFEEQRSGYLTEQTAQMARTHDEQQQQPLERTLELIAERCS 200
            |...........|..||.::.::|...:...|:|..:........:..:..|||.    .|:...
 Worm   134 LKNGCEQHTASAYQTLSNKIAVSLVMLQNYFGFLEREDKWADNAEEPNKDHPLEE----FAKTSF 194

  Fly   201 LAQALRSIFHDLCTTGLLSTSLNHNLTLCFCLPAKAHQLHK-----KGSMVDPETIDRCLRALKP 260
            :.|.|..:|.::...|.:...|.:.:.|.||  .:||.|.|     ||.    :.||..:|.:||
 Worm   195 IVQPLAEMFEEVRNRGNIHKYLINFVELGFC--DEAHALTKLNVVPKGR----QEIDEIVRKMKP 253

  Fly   261 YHGMLLLVDFAELLDCVPPTGARMLWQLVDVYDPLISLQSMSSNADLSIEHVYKLVSHLVYWAKA 325
            |||:|||.|.....|..|     ::.:|:....|..|:..||:.:.:.|..|:.::.||:.|.:|
 Worm   254 YHGILLLEDVWPTPDANP-----IVAKLLSHCSPDRSILDMSTASGIPIFEVFMIIRHLLQWTRA 313

  Fly   326 TIIYPLCETNVYVIAPD-APLHTKSHLVEKFSARFAG-MSLFEVISDFSLPTSIG---HLTTPLQ 385
            .:|||||.||:|..|.. .||   ..:.|||:|:|.. :.|...::.|:.|.::.   ....||.
 Worm   314 ILIYPLCNTNIYTSATSPQPL---DKMAEKFTAQFGNTIHLAAGLAHFNPPKTLDTFIRKNLPLH 375

  Fly   386 QPARQGILAQMVIWMLQHHLLMQLHTY--------VQFMPSEDEFGDSASCSNHLRDAISDEEGD 442
            :   ||:.|::|:.:|:|.:|||||.:        :..:|...|                     
 Worm   376 E---QGVRAKLVVALLRHQMLMQLHQFYYILKPYSIAILPEPKE--------------------- 416

  Fly   443 QEPDADELHGSMLSMSSHPLPVPAVLVGGHRREASE--DHSSLASDNIAVQPSSSHKSNFSITAS 505
                                |.||        |.::  :.|:|.:|                ...
 Worm   417 --------------------PCPA--------EFTKIIEESTLPND----------------VKG 437

  Fly   506 MSTDNCDSLDSMEDEQKLKELLQVFSDADRAAIRRIPASANVDDLSLLVKLYQMGYFKSEHHLEE 570
            :..|.|            .|:|:..|   .|:::|        .|||.||:..|  ....|||||
 Worm   438 VVADIC------------AEMLETTS---YASVKR--------TLSLFVKVAPM--MDGNHHLEE 477

  Fly   571 IMYFENLRRSQLLQLLDKFRDVLIIYETED 600
            |.|..||.|:::..:...|:.|:..:...|
 Worm   478 IKYKNNLDRTEIEGVFVSFKLVIATFRRPD 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nprl3NP_648680.2 NPR3 76..413 CDD:451662 101/354 (29%)
nprl-3NP_501396.1 NPR3 <251..402 CDD:451662 54/161 (34%)

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