DRSC/TRiP Functional Genomics Resources

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Protein Alignment: DCTN1-p150 and clip3

Sequence 1:NP_524061.1 Gene:DCTN1-p150 FlyBaseID:FBgn0001108 Length:1265 Species:Drosophila melanogaster
Sequence 2:XP_005157797.1 Gene:clip3 ZFINID:ZDB-GENE-131127-193 Length:539 Species:Danio rerio

Alignment Length:158 Identity:49/159 (31%)
Similarity:71/159 (45%) Gaps:35/159 (22%)


  Fly     1 MSEKNLKVGARVELTGKDLLGTVAYVGMTSFAVGKWVGVVLDEPKGKNSGSIKGQQYFQCDENCG 65
            :|...||:|.||.| .:...||:.:.|.|.||.|:|||:.||||:|||.||:.|.:||.|....|
Zfish   277 LSSLGLKLGDRVVL-DETKTGTLRFCGTTEFASGQWVGLELDEPEGKNDGSVGGIRYFICSAKQG 340

  Fly    66 MFVRPTQL-RLLEAAPGSRRSIEDVSGATPTAAQPTKARLSSSRTSLSSSRQSLLGSRTQLTTSL 129
            :|...::: :.:|..|.|            ..:.|...|:..||.:....::.....|       
Zfish   341 IFAPVSKITKAVEQTPSS------------VTSTPKTPRMDLSRVTGKIKKEKKEKDR------- 386

  Fly   130 SERTASSSSIGPRK------SLAPQNSK 151
             |:|       |||      ||.|...|
Zfish   387 -EKT-------PRKKSLSGVSLDPDGVK 406

Known Domains:


GeneSequenceDomainRegion External IDIdentity
DCTN1-p150NP_524061.1 CAP_GLY 8..74 CDD:214997 29/67 (43%)
Dynactin 553..834 CDD:289240
clip3XP_005157797.1 ANK 100..222 CDD:238125
ANK repeat 108..145 CDD:293786
Ank_2 110..216 CDD:289560
ANK repeat 147..178 CDD:293786
ANK repeat 186..216 CDD:293786
CAP_GLY 285..348 CDD:279625 29/64 (45%)
CAP_GLY 410..473 CDD:279625
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5244
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 avgDist Average_Evolutionary_Distance R1398
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.930

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