DRSC/TRiP Functional Genomics Resources

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Protein Alignment bru3 and celf1

DIOPT Version :10

Sequence 1:NP_001369050.1 Gene:bru3 / 39527 FlyBaseID:FBgn0264001 Length:552 Species:Drosophila melanogaster
Sequence 2:XP_012816629.1 Gene:celf1 / 549906 XenbaseID:XB-GENE-854036 Length:534 Species:Xenopus tropicalis


Alignment Length:456 Identity:185/456 - (40%)
Similarity:240/456 - (52%) Gaps:104/456 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 MNRALQLKPAENESRS---------EH----LDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTI 72
            |:..:|:|||::|..:         ||    .||||||||:||:..|:|:|.:|..||.|||..|
 Frog   115 MHHPIQMKPADSEKNNGGLNTVLYPEHPASVEDRKLFVGMVSKKCNENDIRAMFSQFGQIEESRI 179

  Fly    73 LRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRM-QQMAGH 136
            ||||||.|:|||||.|.::..||.||..:|.:|||.|.||.:|||:|||:|:::.:|| ||:...
 Frog   180 LRGPDGMSRGCAFVTFTTRSMAQMAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRMTQQLQQQ 244

  Fly   137 MNLLNPFV-------FNQFSPY----------------------------GAYA----------Q 156
            |..||...       .:..:|.                            |.||          |
 Frog   245 MQQLNAASMWGNLAGLSSLAPQYLALYLQLLQQTASSGNLNSLSGLHPMGGEYATGMTSGLNAMQ 309

  Fly   157 QQQQAALMAAAATA---PGSAAAYMNPMAALATQIPHGLNGTGQPPSL--PSPTMPNFNMGA-NT 215
            .|..|||.|||:.|   |.:.:|.....:.|:.     |..:|..||.  .|...|..::|| .|
 Frog   310 LQNLAALAAAASAAQNTPSAGSALTTSSSPLSI-----LTSSGSSPSSNNNSAVNPMASLGALQT 369

  Fly   216 PNGQPGGAAAAAAAAAAADGVFTNGIPQTAFPGHPLHLTIPPQGLPNGDAAT---LQHAFPGLPP 277
            ..|...|....:.|..||   ...|:..:               |.||..:|   |..|:.|:..
 Frog   370 LAGATAGLNVGSLAGMAA---LNGGLGSS---------------LSNGTGSTMEALSQAYSGIQQ 416

  Fly   278 FPGVAFPAVYGQFPQALPPPLAAVAPTQREDFLMFPGCSISGPEGCNLFIYHLPQEFGDAELMQM 342
            :...|.|::|.|  ..|.......|.:|:|           ||||.|||||||||||||.:|:||
 Frog   417 YAAAALPSLYNQ--SLLSQQGLGAAGSQKE-----------GPEGANLFIYHLPQEFGDQDLLQM 468

  Fly   343 FLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRP 407
            |:|||||:|:|||||:.||.||||||||:|||.|||||||:|||||||||||||||||.|:.|:|
 Frog   469 FMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKP 533

  Fly   408 Y 408
            |
 Frog   534 Y 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru3NP_001369050.1 RRM2_CELF3_4_5_6 40..120 CDD:410043 47/79 (59%)
ELAV_HUD_SF 43..404 CDD:273741 171/415 (41%)
RRM3_CELF3_4_5_6 319..397 CDD:241083 64/77 (83%)
celf1XP_012816629.1 RRM1_CELF1_2_Bruno 42..125 CDD:410040 4/9 (44%)
RRM2_CELF1_2 147..227 CDD:410042 47/79 (59%)
RRM3_CELF1_2 442..533 CDD:241082 73/101 (72%)

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