Protein Alignment bru3 and Celf4

DIOPT Version :10

• Sequence 1: NP_001369050.1
• Gene: bru3 / 39527
• FlyBaseID: FBgn0264001
• Length: 552
• Species: Drosophila melanogaster
• Sequence 2: XP_038952814.1
• Gene: Celf4 / 307540
• RGDID: 1307630
• Length: 565
• Species: Rattus norvegicus
• Alignment Length: 463
• Identity: 218/463 - (47%)
• Similarity: 261/463 - (56%)
• Gaps: 96/463 - (20%)

  Fly    21 MNRALQLKPAENESRS--------EHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPD 77
            |||.:|:|||::|||.        ...|||||||||:|||:|||||::|..||.|||||||||||
  Rat   124 MNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPD 188

  Fly    78 GASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNP 142
            |.||||||||:.|..|||:||..|||||||||||||||||:|||:|||.:||||||||.|.:.||
  Rat   189 GNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNP 253

  Fly   143 FVFNQFSPYGAYAQ--QQQQAALMAAAATAPGSAAAYMNPMAALAT---QIPHGLN--------- 193
            ... .|..||||||  .||||||||:.|     ...|:|||||.|.   |....||
  Rat   254 MAI-PFGAYGAYAQALMQQQAALMASVA-----QGGYLNPMAAFAAAQMQQMAALNMNGLAAAPM 312

  Fly   194 ----GTGQPPSLPSPTMPNF--NMGAN-------TPNGQPGGAAAAAAAAAAADGVFTNGIPQTA 245
                |...||.:.:|.:|:.  .:|.|       ..||||           ||:.||.|||
  Rat   313 TPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQP-----------AAEAVFANGI---- 362

  Fly   246 FPGHPLHLTIPPQGLPNGDAATLQHAFPGLPPFPG-VAFPAVYGQFPQALPPPLAAVAPTQREDF 309
               ||.....|....|      ||.|:.|:..:.| .|:||.|||..||.|.|...:...|||
  Rat   363 ---HPYPAQSPTAADP------LQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQRE-- 416

  Fly   310 LMFPGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNP 374
                     |||||||.|||||||||||||||||||||||||||||:|||||||||||    .:|
  Rat   417 ---------GPEGCNLLIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFG----RHP 468

  Fly   375 ASAQAAIQAMNGFQIGM----KRLKVQLKRPKDASRPYXQSEFLKRNSQQPTGA----------T 425
            ..::....:..|.|..:    :||: :|::|......: ..|.|....::..||          .
  Rat   469 VPSRCQAPSCQGGQCAISSSARRLR-ELRQPGQRPDRHPGHERLPDRHEEAQGAAEAAQRRQSPV 532

  Fly   426 TSATGALP 433
            .||.|::|
  Rat   533 LSAGGSVP 540

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bru3	NP_001369050.1	RRM2_CELF3_4_5_6	40..120	CDD:410043	63/79 (80%)
		ELAV_HUD_SF	43..404	CDD:273741	197/392 (50%)
		RRM3_CELF3_4_5_6	319..397	CDD:241083	52/81 (64%)
Celf4	XP_038952814.1	RRM1_CELF3_4_5_6	49..135	CDD:410041	7/10 (70%)
		PABP-1234	<56..378	CDD:130689	139/283 (49%)
		RRM2_CELF3_4_5_6	151..231	CDD:410043	63/79 (80%)
		RRM_SF	417..>465	CDD:473069	45/47 (96%)