Protein Alignment Poc1 and SWD3

DIOPT Version :10

• Sequence 1: NP_001261799.1
• Gene: Poc1 / 39502
• FlyBaseID: FBgn0036354
• Length: 403
• Species: Drosophila melanogaster
• Sequence 2: NP_009734.1
• Gene: SWD3 / 852472
• SGDID: S000000379
• Length: 315
• Species: Saccharomyces cerevisiae
• Alignment Length: 329
• Identity: 75/329 - (22%)
• Similarity: 137/329 - (41%)
• Gaps: 66/329 - (20%)

  Fly    16 GHSGGI--TQLRFGPDGAQIATSSTDSTVILWNLNQAARCIR---FASHSAPVNGVAWSPKGNLV 75
            |...|:  |..:..||| |....:....::::::|:  |.:.   ..||:.|.:.:.|||.|..:
Yeast     9 GTQNGLKATCAKISPDG-QFLAITQGLNILIYDINR--RTVSQTLVTSHARPFSELCWSPDGQCI 70

  Fly    76 ASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSF 140
            |:|..|.:|:|..... |:...|:.|:..|.|:.|:..|:|:.|:|.|:|.|||.......:.:.
Yeast    71 ATASDDFSVEIIHLSY-GLLHTFIGHTAPVISLTFNRKGNLLFTSSMDESIKIWDTLNGSLMKTI 134

  Fly   141 AQQNNWVRSAKFSPN-GKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVA 204
            :..:..|.|.....| ..::::.|.|..:||:|.::|.|::|.|.::...|:
Yeast   135 SAHSEAVVSVDVPMNDSSILSSGSYDGLIRIFDAETGHCLKTLTYDKDWKRE------------- 186

  Fly   205 LGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYT---- 265
               |.:                  .|::.|.|..:..:||..|.|..::|.|.:.|..:.|
Yeast   187 ---NGV------------------VPISQVKFSENARYLLVKSLDGVVKIWDCIGGCVVRTFQVQ 230

  Fly   266 -----LTGHT---DAVNAVAFSRDGDK--FATGGSDRQLLVWQSN----LHTYDASQFEAKSALA 316
                 :..|:   |.:|    ..||..  ..:|..:..:..|.|:    |...|.|.:...|.:.
Yeast   231 PLEKGVLHHSCGMDFLN----PEDGSTPLVISGYENGDIYCWNSDTKSLLQLLDGSLYHHSSPVM 291

  Fly   317 SSSC 320
            |..|
Yeast   292 SIHC 295

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Poc1	NP_001261799.1	WD40	<7..298	CDD:441893	67/301 (22%)
		WD40 repeat	22..58	CDD:293791	7/38 (18%)
		WD40 repeat	63..99	CDD:293791	10/35 (29%)
		WD40 repeat	106..140	CDD:293791	11/33 (33%)
		WD40 repeat	147..183	CDD:293791	11/36 (31%)
		WD40 repeat	189..224	CDD:293791	2/34 (6%)
		WD40 repeat	231..254	CDD:293791	6/22 (27%)
		WD40 repeat	273..297	CDD:293791	4/25 (16%)
SWD3	NP_009734.1	WD40 repeat	17..53	CDD:293791	7/38 (18%)
		WD40	<21..293	CDD:441893	70/313 (22%)
		WD40 repeat	59..94	CDD:293791	11/35 (31%)
		WD40 repeat	99..135	CDD:293791	12/35 (34%)
		WD40 repeat	142..178	CDD:293791	10/35 (29%)
		WD40 repeat	192..228	CDD:293791	10/35 (29%)
		WD40 repeat	236..284	CDD:293791	11/51 (22%)
		WD40 repeat	290..312	CDD:293791	2/6 (33%)