Protein Alignment Poc1 and CG12608

DIOPT Version :10

• Sequence 1: NP_001261799.1
• Gene: Poc1 / 39502
• FlyBaseID: FBgn0036354
• Length: 403
• Species: Drosophila melanogaster
• Sequence 2: NP_573019.1
• Gene: CG12608 / 32463
• FlyBaseID: FBgn0030630
• Length: 443
• Species: Drosophila melanogaster
• Alignment Length: 365
• Identity: 79/365 - (21%)
• Similarity: 145/365 - (39%)
• Gaps: 84/365 - (23%)

  Fly    30 GAQIATSSTDSTV--ILWNLNQAARCIRFA--SHSAPVNGVA----WSPKGNLVASAGHDRTVKI 86
            |.::..|.||...  :.:.|.|.     ||  ||:..:..||    |      |||.|.|..:.:
  Fly    18 GFKLIKSPTDGLTDSVKFELKQT-----FADSSHAGSITSVAVQWPW------VASGGTDDRIFV 71

  Fly    87 WEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNW----- 146
            ::.:.|..|...::|:..|.::.|......:|:.|||..    .:|.|  |.|:.::.:|
  Fly    72 YDMRTRKQSQIILSHAGRVNTLKFTPDLSHLLSGSDDGH----MIATR--VGSWTKEGDWQKAHA 130

  Fly   147 ---VRSAKFSPNGKLVATASDDKSVRIYDVDSGE-CVRTFTEERAA----PRQLAWHPWGNMLAV 203
               |......|:.||..:...|:.:..:::.:|. ..:|..:.:|.    |..|:|...|:.
  Fly   131 GQAVTHISCHPSSKLALSLGGDQVLNTWNLVNGRVAYKTNLKNKATLGLQPGCLSWSKQGDH--- 192

  Fly   204 ALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPS---------GHFLLSGSDDRTIRILDLL- 258
                     |.:||..:|:::.:.:|.|......|:         |:..|:|.|:..|..:.|.
  Fly   193 ---------FTLSGPLVLEIWGIENAHVMRRIEMPAKPICITWLDGNECLTGLDNGNIAWISLKD 248

  Fly   259 -EGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQSNLHTYDASQFEAKSALASSSCES 322
             :..|...:..|...|.|:|:.  .:..||..|..::.||:.::.|....:      :|||..:
  Fly   249 EDDTPPTFILAHEARVKAIAYL--NELLATVSSAGEIKVWKIDMETRKLEE------IASSFMD- 304

  Fly   323 SGVSSKQSEGSSTSKSNDLSIRIDPRQSLAYQLSEENFQV 362
                         .:..||.: :|.||....|..|:..:|
  Fly   305 -------------CRPTDLGL-LDLRQFGNVQPVEQRIKV 330

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Poc1	NP_001261799.1	WD40	<7..298	CDD:441893	66/299 (22%)
		WD40 repeat	22..58	CDD:293791	8/31 (26%)
		WD40 repeat	63..99	CDD:293791	10/39 (26%)
		WD40 repeat	106..140	CDD:293791	8/33 (24%)
		WD40 repeat	147..183	CDD:293791	7/36 (19%)
		WD40 repeat	189..224	CDD:293791	8/34 (24%)
		WD40 repeat	231..254	CDD:293791	7/31 (23%)
		WD40 repeat	273..297	CDD:293791	6/23 (26%)
CG12608	NP_573019.1	WD40	<36..289	CDD:441893	63/283 (22%)
		WD40 repeat	51..85	CDD:293791	10/39 (26%)
		WD40 repeat	90..128	CDD:293791	11/43 (26%)
		WD40 repeat	135..170	CDD:293791	5/34 (15%)
		WD40 repeat	181..214	CDD:293791	10/44 (23%)
		WD40 repeat	264..286	CDD:293791	6/23 (26%)