| Sequence 1: | NP_001261799.1 | Gene: | Poc1 / 39502 | FlyBaseID: | FBgn0036354 | Length: | 403 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_569960.2 | Gene: | Rbcn-3B / 31155 | FlyBaseID: | FBgn0023510 | Length: | 1525 | Species: | Drosophila melanogaster |
| Alignment Length: | 394 | Identity: | 76/394 - (19%) |
|---|---|---|---|
| Similarity: | 130/394 - (32%) | Gaps: | 120/394 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 9 ALERHFTGHSGGITQLRFGPDGAQ------IATSSTDSTVILWNLNQAARCIRFAS-HSAPVNGV 66
Fly 67 AWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHL-----------MLTA 120
Fly 121 SDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASD----DKSVRIYDVDSGECVRT 181
Fly 182 FTEERAAP-------RQLAWHPWGN-----------MLAVALGCN------RIKIFDVSGSQLLQ 222
Fly 223 LYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGD---K 284
Fly 285 FATGGSDRQLLVWQSNLHTYDASQFEAKSALASSSCESSGVSSKQSEGSSTSKSNDLSIRIDPRQ 349
Fly 350 SLAY 353 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Poc1 | NP_001261799.1 | WD40 | <7..298 | CDD:441893 | 67/337 (20%) |
| WD40 repeat | 22..58 | CDD:293791 | 11/41 (27%) | ||
| WD40 repeat | 63..99 | CDD:293791 | 6/35 (17%) | ||
| WD40 repeat | 106..140 | CDD:293791 | 7/44 (16%) | ||
| WD40 repeat | 147..183 | CDD:293791 | 8/39 (21%) | ||
| WD40 repeat | 189..224 | CDD:293791 | 11/58 (19%) | ||
| WD40 repeat | 231..254 | CDD:293791 | 3/22 (14%) | ||
| WD40 repeat | 273..297 | CDD:293791 | 4/26 (15%) | ||
| Rbcn-3B | NP_569960.2 | WD40 repeat | 20..63 | CDD:293791 | |
| WD40 | <22..202 | CDD:475233 | |||
| WD40 repeat | 68..107 | CDD:293791 | |||
| WD40 repeat | 118..152 | CDD:293791 | |||
| WD40 repeat | 160..204 | CDD:293791 | |||
| WD40 repeat | 212..251 | CDD:293791 | |||
| WD40 repeat | 406..459 | CDD:293791 | |||
| WD40 | 453..>597 | CDD:475233 | 30/119 (25%) | ||
| WD40 repeat | 513..555 | CDD:293791 | 12/42 (29%) | ||
| WD40 repeat | 560..596 | CDD:293791 | 10/57 (18%) | ||
| GvpP | <735..816 | CDD:444004 | 17/103 (17%) | ||
| WD40 | <1408..>1469 | CDD:441893 | |||
| WD40 repeat | 1439..1466 | CDD:293791 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||