| Sequence 1: | NP_001261799.1 | Gene: | Poc1 / 39502 | FlyBaseID: | FBgn0036354 | Length: | 403 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001024299.1 | Gene: | wdr-5.3 / 179489 | WormBaseID: | WBGene00013862 | Length: | 501 | Species: | Caenorhabditis elegans |
| Alignment Length: | 306 | Identity: | 79/306 - (25%) |
|---|---|---|---|
| Similarity: | 134/306 - (43%) | Gaps: | 55/306 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 3 GLFRDP-----ALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAP 62
Fly 63 VNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAK 127
Fly 128 IWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQL 192
Fly 193 AWHPWGNMLAVAL--GCNRIKIFD-VSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRI 254
Fly 255 LDLLEGRPIYTLTGHTDAVNAVAFSRD---GDKFATGGSDRQLLVW 297 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Poc1 | NP_001261799.1 | WD40 | <7..298 | CDD:441893 | 78/302 (26%) |
| WD40 repeat | 22..58 | CDD:293791 | 7/35 (20%) | ||
| WD40 repeat | 63..99 | CDD:293791 | 13/35 (37%) | ||
| WD40 repeat | 106..140 | CDD:293791 | 3/33 (9%) | ||
| WD40 repeat | 147..183 | CDD:293791 | 13/35 (37%) | ||
| WD40 repeat | 189..224 | CDD:293791 | 11/37 (30%) | ||
| WD40 repeat | 231..254 | CDD:293791 | 9/22 (41%) | ||
| WD40 repeat | 273..297 | CDD:293791 | 4/26 (15%) | ||
| wdr-5.3 | NP_001024299.1 | PRK10263 | <3..>192 | CDD:236669 | |
| WD40 | 205..499 | CDD:238121 | 77/294 (26%) | ||
| WD40 repeat | 216..253 | CDD:293791 | 7/36 (19%) | ||
| WD40 repeat | 259..295 | CDD:293791 | 15/49 (31%) | ||
| WD40 repeat | 300..336 | CDD:293791 | 13/35 (37%) | ||
| WD40 repeat | 343..378 | CDD:293791 | 11/36 (31%) | ||
| WD40 repeat | 385..421 | CDD:293791 | 11/35 (31%) | ||
| WD40 repeat | 429..466 | CDD:293791 | 6/26 (23%) | ||
| WD40 repeat | 472..498 | CDD:293791 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||