| Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_009292765.2 | Gene: | lrfn2b / 558484 | ZFINID: | ZDB-GENE-121214-111 | Length: | 781 | Species: | Danio rerio |
| Alignment Length: | 287 | Identity: | 78/287 - (27%) |
|---|---|---|---|
| Similarity: | 121/287 - (42%) | Gaps: | 71/287 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 135 LNLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTV-PDPVI 198
Fly 199 FQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRL 263
Fly 264 DRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEY 328
Fly 329 LNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEGLFPWKDLQTLDLSENPLSCDCRVMWL 393
Fly 394 HNLLVAKNASQDDVSELLCEFPERLRG 420 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | |
| LRR | 82..406 | CDD:443914 | 71/271 (26%) | ||
| leucine-rich repeat | 84..107 | CDD:275380 | |||
| leucine-rich repeat | 108..131 | CDD:275380 | |||
| leucine-rich repeat | 132..155 | CDD:275380 | 7/19 (37%) | ||
| leucine-rich repeat | 156..179 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 180..204 | CDD:275380 | 9/24 (38%) | ||
| leucine-rich repeat | 205..228 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 229..252 | CDD:275380 | 2/22 (9%) | ||
| leucine-rich repeat | 253..276 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 277..300 | CDD:275380 | 10/22 (45%) | ||
| leucine-rich repeat | 301..322 | CDD:275380 | 3/20 (15%) | ||
| leucine-rich repeat | 326..350 | CDD:275380 | 4/23 (17%) | ||
| leucine-rich repeat | 351..373 | CDD:275380 | 2/21 (10%) | ||
| LRRCT | 382..434 | CDD:214507 | 14/39 (36%) | ||
| lrfn2b | XP_009292765.2 | None | |||
| Blue background indicates that the domain is not in the aligned region. | |||||