Protein Alignment trn and lrg1

DIOPT Version :10

• Sequence 1: NP_001261796.1
• Gene: trn / 39491
• FlyBaseID: FBgn0010452
• Length: 751
• Species: Drosophila melanogaster
• Sequence 2: XP_004911101.1
• Gene: lrg1 / 116406453
• XenbaseID: XB-GENE-984373
• Length: 372
• Species: Xenopus tropicalis
• Alignment Length: 433
• Identity: 106/433 - (24%)
• Similarity: 160/433 - (36%)
• Gaps: 110/433 - (25%)

  Fly     2 QRNMMIAFVGIWCILASIGVEPAAGLAN-CPPGCQCDDN-TLVVQCGEGQLDVLPIALNPSIQRL 64
            :.|..::|:    .:..|.:..|.||.: ||..|.|..: .:.|.|...:||..|.
 Frog    36 RHNSGMSFI----FVVVIFIPSALGLTDPCPSLCNCTSSLNISVVCISRELDSFPC--------- 87

  Fly    65 VIKSNKIKTIDSSIQFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGL 129
               |..:.||..|::|
 Frog    88 ---SFPLHTISISVEF------------------------------------------------- 100

  Fly   130 SAVTVLNLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVP 194
                      ..|:.|..|:|:.|..::||:|..|.:..|..:.|..||.|..|.|.:|.:.:|
 Frog   101 ----------TNITSLCNGSFSELPNLQELHLSNNALQSLPIQFFVPLSSLHTLDLTNNLIQSV- 154

  Fly   195 DPVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLS 259
            .|.:|..:|:|..|.|..|.|..:.......||.|..|:|....|:.::..||..|..|..||||
 Frog   155 TPTLFLDVPALRFLVLRGNLLTKLWISKISILKNLNWLDLSHNHLKEVNSMSFSSLNNLENLDLS 219

  Fly   260 DNRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNG 324
            .|:|.::||..|..|..|::|:|..|:...:....|.....||.:               |....
 Frog   220 YNQLHQLPSSLLKGLPLLQRLNLEGNNLSSLPSDFFAATPFLKHV---------------FLARN 269

  Fly   325 NLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEG-LFPWKDL-----QTLDLSENP 383
            :|.:|           .:|.|..:..||.:.|..|.|.||..| |...|.|     ||||||.||
 Frog   270 SLHFL-----------PKGLLLPVMSLKTLDLSENMLKSLPSGFLLESKGLNDSMEQTLDLSNNP 323

  Fly   384 LSCDCRVMWLHNLLVAKNASQDDVSELLCEFPERLRGESLRHL 426
            ..|||.::.||..:.....:...:....|..|..|:..:|..:
 Frog   324 WHCDCHLLSLHQWVTKHKHTLYFIDNTQCAGPGALKNRTLHQV 366

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trn	NP_001261796.1	leucine-rich repeat	62..80	CDD:275380	4/17 (24%)
		LRR	82..406	CDD:443914	82/329 (25%)
		leucine-rich repeat	84..107	CDD:275380	0/22 (0%)
		leucine-rich repeat	108..131	CDD:275380	0/22 (0%)
		leucine-rich repeat	132..155	CDD:275380	5/22 (23%)
		leucine-rich repeat	156..179	CDD:275380	7/22 (32%)
		leucine-rich repeat	180..204	CDD:275380	7/23 (30%)
		leucine-rich repeat	205..228	CDD:275380	6/22 (27%)
		leucine-rich repeat	229..252	CDD:275380	7/22 (32%)
		leucine-rich repeat	253..276	CDD:275380	11/22 (50%)
		leucine-rich repeat	277..300	CDD:275380	5/22 (23%)
		leucine-rich repeat	301..322	CDD:275380	3/20 (15%)
		leucine-rich repeat	326..350	CDD:275380	4/23 (17%)
		leucine-rich repeat	351..373	CDD:275380	9/22 (41%)
		LRRCT	382..434	CDD:214507	11/45 (24%)
lrg1	XP_004911101.1	LRR	<107..363	CDD:443914	83/282 (29%)
		leucine-rich repeat	117..140	CDD:275380	7/22 (32%)
		leucine-rich repeat	141..164	CDD:275380	7/23 (30%)
		leucine-rich repeat	165..188	CDD:275380	6/22 (27%)
		leucine-rich repeat	189..212	CDD:275380	7/22 (32%)
		leucine-rich repeat	213..236	CDD:275380	11/22 (50%)
		leucine-rich repeat	237..260	CDD:275380	5/22 (23%)
		leucine-rich repeat	261..284	CDD:275380	7/48 (15%)