DRSC/TRiP Functional Genomics Resources

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Protein Alignment trn and si:dkey-182i3.11

DIOPT Version :10

Sequence 1:NP_001261796.1 Gene:trn / 39491 FlyBaseID:FBgn0010452 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_021322095.2 Gene:si:dkey-182i3.11 / 100334238 ZFINID:ZDB-GENE-121214-258 Length:673 Species:Danio rerio


Alignment Length:518 Identity:128/518 - (24%)
Similarity:223/518 - (43%) Gaps:125/518 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 VQCGEGQLDVLPIALNPS---IQRLVIKSNKIKTIDSS-------------------------IQ 79
            :|..:..:|::.:.:..:   :.:|.:..||:|::.:.                         :|
Zfish   167 LQLRDNMIDMIEMNVFENCTYLAKLYLSKNKLKSVGNGSFKGATGLNHLDLGLNGLAGIPTIVLQ 231

  Fly    80 FYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISE 144
            ..:.||.|.|..|.:.:||...|:....|:.:.|::|.:..|||.:|..||.:..|:|..||:..
Zfish   232 ETSNLTSLYLQKNDITSIPDNVFSEILSLKHLDLSYNGLVSISNGSFRSLSQLVYLDLSFNQLQT 296

  Fly   145 LHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELF 209
            |.|..|..|.|:|.|||..|::..|....|..|:.|:.|.||.|.::.:| |.:|..:.:|.:|.
Zfish   297 LTQHVFEDLGKLENLNLYHNKLTSLPNNMFKNLTMLKELQLDSNNISVIP-PDLFHPLSALKDLQ 360

  Fly   210 LGMNTLQSIQADAFQDLKGLTRLE-----------------LKGASLRN-----ISHDSFLGLQE 252
            |..|.:..:.:..|:.|:.|.:|:                 ||..:|.|     ||..||..|..
Zfish   361 LDNNHISKLHSHTFKKLRQLKQLDISSNDLTKIPNHLFHKNLKELNLENNHISFISKFSFKNLHR 425

  Fly   253 LRILDLSDNRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMT 317
            |:.|.||.|.|.::....|:.|.||.:|.|.:|..|.|..|.|.||:.|:.|:::.. ::..::.
Zfish   426 LQSLKLSHNNLSKLYRELLTNLTRLRELLLNENQIETIPVGFFKGLENLRVLDLSNN-KMHFILP 489

  Fly   318 GAFSDNG------------------------NLEYLNLSSNKM----------LLEVQEGAL--- 345
            .||:|..                        ||..|:|.:||:          |:.::|..|   
Zfish   490 DAFNDLSALKDLDLSFNFLHNLPEDIFASLRNLTKLHLQNNKLRYLPSRLFSALVGLEELHLDRN 554

  Fly   346 ----------SGLSQLKHVVLKANALTSLAEG-LFPWKDLQTLDLSENPLSCDCRVM-----WLH 394
                      .||.:|..:.:|:|.|.|:.:| |.|.:.|:.:.|..||..|...|:     |.:
Zfish   555 YIQRIHPTQFEGLVKLHELDMKSNQLRSMEDGTLMPLRKLKRIHLDGNPWDCSTVVILYISQWFN 619

  Fly   395 NLLVAKNASQDDVSELLCEFPERLRGESLRHLNPAMM-------GCTHADPRKQALIGALLVG 450
            |           .::|:...|....|::|.  |||:.       .|..|:.::..::..|::|
Zfish   620 N-----------NTQLVKTTPMCSSGQNLS--NPALFPSSLLNSACFSANIKQLTVLFVLILG 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trnNP_001261796.1 leucine-rich repeat 62..80 CDD:275380 4/42 (10%)
LRR 82..406 CDD:443914 110/398 (28%)
leucine-rich repeat 84..107 CDD:275380 8/22 (36%)
leucine-rich repeat 108..131 CDD:275380 8/22 (36%)
leucine-rich repeat 132..155 CDD:275380 8/22 (36%)
leucine-rich repeat 156..179 CDD:275380 8/22 (36%)
leucine-rich repeat 180..204 CDD:275380 8/23 (35%)
leucine-rich repeat 205..228 CDD:275380 6/22 (27%)
leucine-rich repeat 229..252 CDD:275380 11/44 (25%)
leucine-rich repeat 253..276 CDD:275380 8/22 (36%)
leucine-rich repeat 277..300 CDD:275380 10/22 (45%)
leucine-rich repeat 301..322 CDD:275380 4/20 (20%)
leucine-rich repeat 326..350 CDD:275380 10/46 (22%)
leucine-rich repeat 351..373 CDD:275380 8/22 (36%)
LRRCT 382..434 CDD:214507 13/63 (21%)
si:dkey-182i3.11XP_021322095.2 PRK15370 <19..>198 CDD:185268 4/30 (13%)
leucine-rich repeat 92..115 CDD:275380
LRR 115..539 CDD:443914 96/373 (26%)
leucine-rich repeat 116..139 CDD:275380
leucine-rich repeat 140..163 CDD:275380
leucine-rich repeat 164..187 CDD:275380 2/19 (11%)
leucine-rich repeat 188..211 CDD:275380 4/22 (18%)
leucine-rich repeat 212..235 CDD:275380 1/22 (5%)
leucine-rich repeat 236..259 CDD:275380 8/22 (36%)
leucine-rich repeat 260..283 CDD:275380 8/22 (36%)
leucine-rich repeat 284..307 CDD:275380 8/22 (36%)
leucine-rich repeat 308..331 CDD:275380 8/22 (36%)
leucine-rich repeat 332..355 CDD:275380 8/23 (35%)
leucine-rich repeat 356..401 CDD:275380 8/44 (18%)
leucine-rich repeat 380..399 CDD:275380 2/18 (11%)
leucine-rich repeat 402..425 CDD:275380 9/22 (41%)
leucine-rich repeat 426..449 CDD:275380 8/22 (36%)
leucine-rich repeat 450..473 CDD:275380 10/22 (45%)
leucine-rich repeat 474..497 CDD:275380 5/23 (22%)
leucine-rich repeat 498..521 CDD:275380 0/22 (0%)
LRR_8 520..580 CDD:404697 14/59 (24%)
leucine-rich repeat 522..545 CDD:275380 6/22 (27%)
leucine-rich repeat 546..569 CDD:275380 4/22 (18%)
leucine-rich repeat 570..591 CDD:275380 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.

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