DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul6 and AT3G46910

DIOPT Version :10

Sequence 1:NP_648620.1 Gene:Cul6 / 39474 FlyBaseID:FBgn0036332 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_190275.1 Gene:AT3G46910 / 823844 AraportID:AT3G46910 Length:247 Species:Arabidopsis thaliana


Alignment Length:240 Identity:49/240 - (20%)
Similarity:89/240 - (37%) Gaps:50/240 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 LYANDKYQDVSLPSRIDKIFTEKVMDFYKSTTLHEFQKIVVSNDYKDFKHFLRYACLAMPEIENG 259
            :|..|.:  ..|...|..||.::..||..|...:...|                   :..|..:|
plant    24 IYVEDAW--TMLKPAIRAIFLDEPQDFACSGLFNAVNK-------------------SWCEKSSG 67

  Fly   260 -TQFKAILKR---YLAARLQETRLSGKDYIQAFLGLCRGPLQRALRDHTKLAEVVDAVCKEEINR 320
             ..:|.||:.   |::|.:|............||.|    |::...|..:..:.:.::...|   
plant    68 EALYKLILEECEIYISAAIQSLESQCDTDPSLFLSL----LEKCWLDFRRKLQFLCSIAGGE--- 125

  Fly   321 KGQIIDPTRLLVTYANELMTKRQESEEAIIDELKRIVKCVEFLSDEYKFIDMYLKALRIRQINET 385
             ||.:.| ..:....:||..|...|.:.:.|:|..|:  ::.:.|:..|:.:.:..|:       
plant   126 -GQTVGP-HSVWDLGSELSPKHLFSAQKVRDKLLSII--LQLIRDQRSFMSVDMTQLK------- 179

  Fly   386 STSDGVESIMYSLLNKKMANFVTRCIYVQLRDVDKLRTLKKEFQD 430
            :|:..|.|:..:.||.....|..:.:|       |....||.|.|
plant   180 NTTRPVMSVHMTQLNNLRGLFYGQSLY-------KSPFFKKPFID 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul6NP_648620.1 COG5647 25..670 CDD:227934 49/240 (20%)
AT3G46910NP_190275.1 Cullin 30..>244 CDD:459983 47/234 (20%)

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