DRSC - DRSC Integrative Ortholog Prediction Tool

DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul6 and cul4a

DIOPT Version :10

Sequence 1:	NP_648620.1	Gene:	Cul6 / 39474	FlyBaseID:	FBgn0036332	Length:	670	Species:	Drosophila melanogaster
Sequence 2:	NP_001015893.1	Gene:	cul4a / 548647	XenbaseID:	XB-GENE-1014775	Length:	753	Species:	Xenopus tropicalis

Alignment Length:	21	Identity:	9/21 - (42%)
Similarity:	11/21 - (52%)	Gaps:	4/21 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly   569 IPLSLSSYNG----SFNGNPG 585
            :||.||...|    |.:|.||
Frog     8 LPLLLSRAQGNPGASLDGRPG 28

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Cul6	NP_648620.1	COG5647	25..670	CDD:227934	9/21 (43%)
cul4a	NP_001015893.1	Cullin	57..654	CDD:459983
cul4a	NP_001015893.1	Cullin_Nedd8	685..745	CDD:463146
Blue background indicates that the domain is not in the aligned region.

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