DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Cul6 and cacul1

Sequence 1:NP_648620.1 Gene:Cul6 FlyBaseID:FBgn0036332 Length:670 Species:Drosophila melanogaster
Sequence 2:XP_003199807.2 Gene:cacul1 ZFINID:ZDB-GENE-170113-2 Length:276 Species:Danio rerio

Alignment Length:149 Identity:35/150 (23%)
Similarity:56/150 (37%) Gaps:46/150 (31%)


  Fly   165 AIRLILSQMPREYNKSLEY-QVY-QVLQSIVELYANDKYQDV--SLPSRIDKIFTEKVMDFYKST 225
            |:.|:|:|.|.|: .|:.| |:| .|.:.:.:.::...|.|:  .:.|.::::..|         
Zfish    65 AVELLLTQSPMEH-ISISYEQIYSHVYKCVCQQHSELLYNDLMWKITSHLEQVSAE--------- 119

  Fly   226 TLHEFQKIVVSNDYKDFKHFLRYACLAMPE--IENGTQFKAILKRYLAAR---LQETRLSGKDYI 285
                                   ...:.||  |||   |...|.||.||.   :.......|.||
Zfish   120 -----------------------LQASPPEHLIEN---FNLALSRYTAALHCIVPVFIYMNKFYI 158

  Fly   286 QAFLGL-CRGPLQRALRDH 303
            :|.|.. .|..|.:...||
Zfish   159 EAKLNRDLRDDLMKLFSDH 177

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Cul6NP_648620.1 COG5647 25..670 CDD:227934 35/150 (23%)
CULLIN 362..500 CDD:214545
Cullin_Nedd8 606..661 CDD:287520
cacul1XP_003199807.2 Cullin 60..>187 CDD:279260 35/150 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5647
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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