DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hip1 and hip1r

DIOPT Version :9

Sequence 1:NP_648597.2 Gene:Hip1 / 39450 FlyBaseID:FBgn0036309 Length:1124 Species:Drosophila melanogaster
Sequence 2:XP_012810604.1 Gene:hip1r / 100144673 XenbaseID:XB-GENE-986342 Length:1066 Species:Xenopus tropicalis


Alignment Length:1173 Identity:350/1173 - (29%)
Similarity:554/1173 - (47%) Gaps:242/1173 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AEKEFYHLN--VSVSKALNGLEAPLKTKHARSIIIMIHKAKEAKTFWMIISRQPLMQSRFTAWKF 67
            ||:|.:..|  :|:|||:|..|||:|.||||.||:..|..|.|.|||......||..|...:|||
 Frog    22 AEREQFDRNQAISISKAINTQEAPVKEKHARRIILGTHHEKGAFTFWSYAIGLPLPSSSILSWKF 86

  Fly    68 SHLLHKVLREGHESAIRHSQSHKKMILEVGKMWGLLQDDIGCCIQAYSKLLATKLNFHDKNRMFP 132
            .|:||||||:||.:.:...|.::..|.|.|::||.:.|..|..:..|:|||..|::||.|:..||
 Frog    87 CHVLHKVLRDGHPNVLSDCQRYRSNIRETGELWGHMHDRYGQLVNIYTKLLLNKISFHVKHPEFP 151

  Fly   133 GTLNISFTELFIAVDRDLNYCFQLCVEIFDYLEDIIALQLTIFSSMEKYRMSSMTPQGQCRLAPI 197
            ..|.::...|..:...|:|..|||.||:|||::..:.|...:|..:......|....|||:|||:
 Frog   152 PGLEVTDDVLEKSAGTDVNNIFQLTVEMFDYMDCELKLAEAVFRQLNSSIAVSQMAAGQCKLAPL 216

  Fly   198 VCLIQDSNALYDLSVRLMFKLHDGVPYDVVSGHRDRFHGLFLKLKSFYNNVRPLQYFKDLITIPE 262
            :.:|||.:.||..:|:||||||..:|.|.:.|||||||..|..||:|:.....:.|||.||.||.
 Frog   217 IQVIQDCSHLYHYTVKLMFKLHSCLPPDTLQGHRDRFHEQFHSLKNFFKRASDMLYFKRLIQIPR 281

  Fly   263 LPDSSPNFKSQNDFTSYVPPVVHVPQ---EPDPVVEDLVDTNNHELEAFSQAQQQLSMLEGIISE 324
            |||..|||...:....:|.|||.:|.   |.:...|.|::        .|.||.         .|
 Frog   282 LPDGPPNFLRASALAEHVKPVVVIPNETPEDEEPAESLIE--------ISAAQP---------VE 329

  Fly   325 KEASIEELSFKLDAMQKNFDALQQSYRHDVQELQQNNTVLSNDLVLAREMCATFRMQNDDLEMQL 389
            :|..:|:|      .|:.|.|                   .|.|:            .||.::|:
 Frog   330 QEQVVEDL------FQQTFGA-------------------PNGLM------------KDDRDLQI 357

  Fly   390 NQNPILLQKAME----EEEKHKLSSEKF-----NKLKTLYTKIRDEHIQLLREQSDCNKSLNKEK 445
            ..    |||.:|    |.||.||.::|:     .::.||..::.::               .|:|
 Frog   358 EN----LQKEIELLRAELEKIKLEAQKYILQLKGQINTLEAELEEQ---------------RKQK 403

  Fly   446 QVNSQLLLETKELTNEISKIKVNVEEKEKTNLILQKQIEEHKEKIAHLEAVKNEMKEKFDDVVKQ 510
            |   :.|::.::|.:|:.|:|....|.|||..:|.    |.::||...|....::|||.:     
 Frog   404 Q---KALVDNEQLRDELEKLKKQKLENEKTQGVLL----EAEKKIQATELRYTKLKEKHN----- 456

  Fly   511 KEIQELDIISTSENLRLNCLKVEELNGNLNDTLEKLSNAESQINAKTEDIEKMLKAFEAEKALLL 575
                  ::|:|...|                 |.|.::...|:....::.|::.:.    |..|.
 Frog   457 ------ELINTHAGL-----------------LRKNADTAKQLTVSQQNQEEVARI----KEELE 494

  Fly   576 TQIEQQSVESKSHSEAQNAQLQEIMDNLEQKDKEFNEVKLQLSSAESQISLKALEIQNNLKAFEA 640
            .|::|...||....|.|:.|.:::...:|.|.||...::..|||.|...|    ::.:.|.:.|.
 Frog   495 FQMDQVKRESDLKLEDQSFQTEQLKSEIEAKKKELLLIQQSLSSTEESKS----QLNSTLMSLEV 555

  Fly   641 E----KSVLLTKIEQLGIEHKNNSEAQNAQLQLTLNNLEQNESALQQTQEIVNQLRQENASAGQR 701
            |    ||:|.||..:|       |.|||               ..:.|:.:.||.:::.||   .
 Frog   556 EKDTLKSLLTTKESEL-------SSAQN---------------LARDTETLFNQEQEKKAS---E 595

  Fly   702 NEDLQSKLSLTEVKLTQATQQI--DAVTSSYQICSTDLSELRKLVIKTVKEI-------CNSK-- 755
            ..||..||:    |.|...|::  ..:...:.|....:.|...::...|.::       |.|.  
 Frog   596 IRDLHEKLN----KKTTDEQKLYQKMLEDQFNIIQGTVREAENIIQDAVAKLDDPLHIRCTSSPD 656

  Fly   756 -LSGSEQQPLDAVPNI-------IREM------------------ETILNKFNNASAINYVASTE 794
             |....|..||::|::       |:.|                  :||:    |.||.:::|..:
 Frog   657 YLVCRAQAALDSIPHLENGHAKYIQNMTDASDLVGALAQFAHLTADTIV----NGSATSHLAPPD 717

  Fly   795 GLQNVMYLGYVFIKLYDQCDVIYKTTTAIETGQEIFSKTNLLCTDICQLFQYLLNNETKEPERQK 859
            ...          :|.|.|.         |.|.              |...||.:.:.|...:..
 Frog   718 HAD----------RLNDSCK---------ECGN--------------QSLDYLSSLKNKHSLKNA 749

  Fly   860 TITDIQTKLRDIEKLIEKIK---ASFEQKIDLDKLLEIELREMDAAIDDAASKITDLLAKAREKD 921
            .:.::...|:.|..|.::::   ...:|: :|..:::.|:....|||:.|..:|.:::.:||:..
 Frog   750 DLAEVNRSLKRIFDLGQELRPKSLDIKQE-ELGDMVDKEMASTSAAIEAAVRRIEEMMNQARKDS 813

  Fly   922 NQTNLEVNGKIVDACTTLMECVKALIQKSRLLQHEIVASQKGNASANEFYRRNSQWSDGLISASK 986
            :...||||.:|:::||.||:.::.|:..|..||.|||.|.:|.|:..|||.:||:|::|||||||
 Frog   814 SGVKLEVNERILNSCTDLMKAIRLLVITSTDLQKEIVESGRGAATTQEFYAKNSRWTEGLISASK 878

  Fly   987 SVAKAANYLVEAANKAIESESGKNFELIVAAQEIAACTTQMVIASKVKAERNSQKLTDLTKASRS 1051
            :|...|..|||:|:|.: ...||..||||.:.||||.|.|:|.||||||::||:.|..|.:.||.
 Frog   879 AVGWGATQLVESADKVV-LHKGKYEELIVGSHEIAASTAQLVAASKVKADKNSKNLPKLQQCSRH 942

  Fly  1052 VTQATGTLVATVKDCNSQLEQQSEIELSKLTPSQIKTMEMEIHVKVLEIEQALQMQRLKLSSFRK 1116
            |.:....:||:.|....|:|.:..::.|.::..::|..|||..|||||:|..||.:|::|...|:
 Frog   943 VNEMAANVVASTKSGQEQIEDKDTMDFSGMSLIKLKKEEMESQVKVLELENMLQNERMRLGELRR 1007

  Fly  1117 EHY 1119
            :||
 Frog  1008 QHY 1010

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hip1NP_648597.2 ANTH 9..281 CDD:284961 114/273 (42%)
TMPIT 402..>504 CDD:285135 27/106 (25%)
I_LWEQ 973..1120 CDD:279885 66/147 (45%)
hip1rXP_012810604.1 ANTH 33..298 CDD:336756 113/264 (43%)
Smc <356..>593 CDD:224117 74/320 (23%)
HIP1_clath_bdg 462..560 CDD:374595 26/122 (21%)
ILWEQ 815..1013 CDD:214607 88/197 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 225 1.000 Domainoid score I2476
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 436 1.000 Inparanoid score I1644
OMA 1 1.010 - - QHG55957
OrthoDB 1 1.010 - - D104219at2759
OrthoFinder 1 1.000 - - FOG0002012
OrthoInspector 1 1.000 - - otm49400
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1344
SonicParanoid 1 1.000 - - X1787
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.010

Return to query results.
Submit another query.