DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klc and klc1b

DIOPT Version :10

Sequence 1:NP_524049.1 Gene:Klc / 39445 FlyBaseID:FBgn0010235 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_956248.1 Gene:klc1b / 335499 ZFINID:ZDB-GENE-030131-7439 Length:631 Species:Danio rerio


Alignment Length:524 Identity:358/524 - (68%)
Similarity:424/524 - (80%) Gaps:31/524 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTQMSQDEIITNTKTVLQGLEALRVEHVSIMNGIAE----VQKD------NEKSDMLRKNIENIE 55
            :.::||:|||:||:.|:||||||:.||.||:..:.|    ::|:      .||:.:||:::|.||
Zfish    12 LEKLSQEEIISNTRLVVQGLEALKSEHTSILQSLTETLRCLKKEEESSLVQEKTSLLRRSVEMIE 76

  Fly    56 LGLSEAQVMMALTSHLQNIEAEKHKLKTQVRRLHQENAWLRDELANTQQKFQASEQLVAQLEEEK 120
            |||.||||||||::||..:|:||.||:.|||||.|||.||||||||||||.|.|||.||||||:|
Zfish    77 LGLGEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLRDELANTQQKLQRSEQSVAQLEEDK 141

  Fly   121 KHLEFMASVKKYDEN----QEQDDACDKSRTDPVVELFPDEENE------DRHNMSPTPPSQFAN 175
            |.||||..:|||||:    :|:|....|...|   :|||::|.|      .:||.|...    |.
Zfish   142 KQLEFMNMLKKYDEDASPAEEKDGEPPKDSLD---DLFPNDEEEHTQGMTQQHNSSAVA----AA 199

  Fly   176 QTSGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLERTSGHDHPDVATMLNILALVYRD 240
            ...|||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||
Zfish   200 AQGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD 264

  Fly   241 QNKYKEAANLLNDALSIRGKTLGENHPAVAATLNNLAVLYGKRGKYKDAEPLCKRALEIREKVLG 305
            ||||||||:|||||||||.||||::||||||||||||||||||||||:|||||||||||||||||
Zfish   265 QNKYKEAAHLLNDALSIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG 329

  Fly   306 KDHPDVAKQLNNLALLCQNQGKYDEVEKYYQRALDIYESKLGPDDPNVAKTKNNLAGCYLKQGRY 370
            |||||||||||||||||||||||:|||.||.|||:|||.:||||||||||||||||.|:||||:|
Zfish   330 KDHPDVAKQLNNLALLCQNQGKYEEVEYYYCRALEIYECRLGPDDPNVAKTKNNLASCFLKQGKY 394

  Fly   371 TEAEILYKQVLTRAHEREFGAIDSKNKPIWQVAEEREE-HKFDNRENTPYGEYGGWHKAAKVDSP 434
            .|||:|||::||||||:|||::|::|||||..|||||| .|..:|:||||||||||:||.||:||
Zfish   395 KEAEVLYKEILTRAHEKEFGSVDAENKPIWMHAEEREEMSKGKHRDNTPYGEYGGWYKACKVNSP 459

  Fly   435 TVTTTLKNLGALYRRQGMFEAAETLEDCAMRSKKEAYDLAKQTKLSQLL---TSNEKRRSKAIKE 496
            ||.|||:||||||||||..|||||||:|||||:|:..|...||::.:||   .::|:|.|:....
Zfish   460 TVNTTLRNLGALYRRQGKMEAAETLEECAMRSRKQGLDPIHQTRVVELLKESDASERRSSRECVS 524

  Fly   497 DLDF 500
            .:.|
Zfish   525 SVRF 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KlcNP_524049.1 TPR 183..>391 CDD:440225 187/207 (90%)
TPR repeat 187..214 CDD:276809 26/26 (100%)
TPR repeat 228..256 CDD:276809 26/27 (96%)
TPR repeat 270..298 CDD:276809 26/27 (96%)
TPR repeat 311..341 CDD:276809 26/29 (90%)
TPR repeat 354..381 CDD:276809 20/26 (77%)
klc1bNP_956248.1 SMC_prok_B 25..>145 CDD:274008 70/119 (59%)
TPR 207..441 CDD:440225 202/233 (87%)
TPR repeat 211..238 CDD:276809 26/26 (100%)
TPR repeat 252..280 CDD:276809 26/27 (96%)
TPR repeat 294..322 CDD:276809 26/27 (96%)
TPR repeat 335..365 CDD:276809 26/29 (90%)
TPR repeat 378..405 CDD:276809 20/26 (77%)
TPR_10 463..500 CDD:463861 27/36 (75%)

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