DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klc and Klc4

DIOPT Version :10

Sequence 1:NP_524049.1 Gene:Klc / 39445 FlyBaseID:FBgn0010235 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001009601.1 Gene:Klc4 / 316226 RGDID:1306555 Length:619 Species:Rattus norvegicus


Alignment Length:506 Identity:337/506 - (66%)
Similarity:405/506 - (80%) Gaps:20/506 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QMSQDEIITNTKTVLQGLEALRVEHVSIMNGIAE----VQKD-------NEKSDMLRKNIENIEL 56
            ::||:||:.:|:.|.||||:|..||.:::..::.    :|:.       :||:..||:::|||||
  Rat    16 RLSQEEILGSTRLVSQGLESLHSEHQAVLQSLSHTIECLQQGGHEEGLVHEKARQLRRSMENIEL 80

  Fly    57 GLSEAQVMMALTSHLQNIEAEKHKLKTQVRRLHQENAWLRDELANTQQKFQASEQLVAQLEEEKK 121
            ||||||||:||.|||..:|:||.||:.|||||.|||.|||||||.|||:.|.|||.|||||||||
  Rat    81 GLSEAQVMLALASHLSTVESEKQKLRAQVRRLCQENQWLRDELAGTQQRLQRSEQAVAQLEEEKK 145

  Fly   122 HLEFMASVKKYDEN----QEQDDACDKSRTDPVVELFPDEENEDRHNMSPTPPSQFANQTSGYEI 182
            ||||:..:::|||:    :|::....|...|   :|||:||.||..|.........|.|..||||
  Rat   146 HLEFLRQLRQYDEDGHSMEEKEGDASKDSLD---DLFPNEEEEDSSNDLSRGQGAAAAQQGGYEI 207

  Fly   183 PARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLERTSGHDHPDVATMLNILALVYRDQNKYKEA 247
            |||||||||||||||:|||||||||||||||||||||||..||||||||||||||||||||||||
  Rat   208 PARLRTLHNLVIQYAAQGRYEVAVPLCKQALEDLERTSGRGHPDVATMLNILALVYRDQNKYKEA 272

  Fly   248 ANLLNDALSIRGKTLGENHPAVAATLNNLAVLYGKRGKYKDAEPLCKRALEIREKVLGKDHPDVA 312
            |:|||||||||..|||.:||||||||||||||||||||||:|||||:|||||||||||.||||||
  Rat   273 AHLLNDALSIRESTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLCQRALEIREKVLGTDHPDVA 337

  Fly   313 KQLNNLALLCQNQGKYDEVEKYYQRALDIYESKLGPDDPNVAKTKNNLAGCYLKQGRYTEAEILY 377
            ||||||||||||||||:.||:||||||.|||.:||||:||||:||||||.||||||:|:|||.||
  Rat   338 KQLNNLALLCQNQGKYEAVERYYQRALAIYERQLGPDNPNVARTKNNLASCYLKQGKYSEAETLY 402

  Fly   378 KQVLTRAHEREFGAIDSKNKPIWQVAEEREE-HKFDNREN-TPYGEYGGWHKAAKVDSPTVTTTL 440
            |::|||||.:|||::|..:||||..|||||| .:..:||: |||.|||||:||.:|.||||.|||
  Rat   403 KEILTRAHVQEFGSVDDDHKPIWMHAEEREEMSRSRSRESGTPYAEYGGWYKACRVSSPTVNTTL 467

  Fly   441 KNLGALYRRQGMFEAAETLEDCAMRSKKEAYDLAKQTKLSQLLTSNEKRRS 491
            :||||||||||..|||||||:||:||:|:..|...|||:::||...:.|::
  Rat   468 RNLGALYRRQGKLEAAETLEECALRSRKQGTDPISQTKVAELLGEGDGRKT 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KlcNP_524049.1 TPR 183..>391 CDD:440225 180/207 (87%)
TPR repeat 187..214 CDD:276809 25/26 (96%)
TPR repeat 228..256 CDD:276809 26/27 (96%)
TPR repeat 270..298 CDD:276809 25/27 (93%)
TPR repeat 311..341 CDD:276809 26/29 (90%)
TPR repeat 354..381 CDD:276809 20/26 (77%)
Klc4NP_001009601.1 SMC_prok_B 33..>148 CDD:274008 65/114 (57%)
TPR 1 55..88 16/32 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 156..200 14/46 (30%)
TPR 208..>409 CDD:440225 175/200 (88%)
TPR 2 211..244 31/32 (97%)
TPR repeat 212..239 CDD:276809 25/26 (96%)
TPR 3 253..286 30/32 (94%)
TPR repeat 253..281 CDD:276809 26/27 (96%)
TPR 4 295..328 30/32 (94%)
TPR repeat 295..323 CDD:276809 25/27 (93%)
TPR repeat 336..366 CDD:276809 26/29 (90%)
TPR 5 337..370 28/32 (88%)
TPR_12 378..496 CDD:315987 81/117 (69%)
TPR 6 379..412 25/32 (78%)
TPR repeat 379..406 CDD:276809 20/26 (77%)
TPR 7 464..497 25/32 (78%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 571..619
Blue background indicates that the domain is not in the aligned region.

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