DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pmm2 and pmm2

DIOPT Version :10

Sequence 1:NP_648589.1 Gene:Pmm2 / 39436 FlyBaseID:FBgn0036300 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_956378.1 Gene:pmm2 / 368229 ZFINID:ZDB-GENE-030722-6 Length:250 Species:Danio rerio


Alignment Length:240 Identity:136/240 - (56%)
Similarity:171/240 - (71%) Gaps:3/240 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLLFDVDGTLTMPRSVVTPEFEEFFYSRVKPRATIGIVGGSDLEKMFEQLNGRKILNEFDFIFPE 76
            |.|||||||||..|...|.:..||. |::|.|..:|:||||||:|:.||| |..:::..|::|.|
Zfish    11 LCLFDVDGTLTAARQKATADMHEFL-SKLKQRVKVGVVGGSDLDKIKEQL-GDDVIDRVDYVFAE 73

  Fly    77 NGLVQIEGGKEVGKQNIIMHLGEETVKRFINFVLRYLSELDVPIKRGTFIEFRNGMMNVCPIGRQ 141
            ||||....||....|||..:|||:.::.||||.|.|||::.:|.||||||||||||:||.||||.
Zfish    74 NGLVAYRFGKLHSVQNIQAYLGEDILQEFINFCLNYLSKIKLPKKRGTFIEFRNGMLNVSPIGRS 138

  Fly   142 CTREERNMFAEYDIEHKVREKMIKDLKQEFADVDLTYSIGGQISFDVFPHGWDKTYCLRHIEAHY 206
            |:::||..|.|.|.:.|:||..:..||:|||...|.:||||||||||||.||||.|||..:|.. 
Zfish   139 CSQQERIEFFELDKKEKIRETFVSVLKEEFAGKGLAFSIGGQISFDVFPEGWDKRYCLGIVEKD- 202

  Fly   207 KFKEIHFFGDKTEPGGNDYEIYSDPRTISHRVYTPKDTQRILTEI 251
            .::.||||||||.||||||||:.|||||.|.|.:|:|||||..|:
Zfish   203 SYQHIHFFGDKTMPGGNDYEIFVDPRTIGHEVKSPEDTQRICREL 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pmm2NP_648589.1 HAD_PMM 12..251 CDD:319784 135/238 (57%)
pmm2NP_956378.1 HAD_PMM 11..247 CDD:319784 135/238 (57%)

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