DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pmm2 and pmm1

DIOPT Version :10

Sequence 1:NP_648589.1 Gene:Pmm2 / 39436 FlyBaseID:FBgn0036300 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001429629.1 Gene:pmm1 / 100007686 ZFINID:ZDB-GENE-180314-1 Length:271 Species:Danio rerio


Alignment Length:242 Identity:121/242 - (50%)
Similarity:164/242 - (67%) Gaps:3/242 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ILLLFDVDGTLTMPRSVVTPEFEEFFYSRVKPRATIGIVGGSDLEKMFEQL-NGRKILNEFDFIF 74
            :|.|||||||||.||..:.||.::|..: :|.:..||:|||||..|:.||| :|.:::.:||::|
Zfish    23 VLCLFDVDGTLTAPREKIDPELDDFIQA-LKQKVKIGVVGGSDYCKIAEQLGDGDEVIQKFDYVF 86

  Fly    75 PENGLVQIEGGKEVGKQNIIMHLGEETVKRFINFVLRYLSELDVPIKRGTFIEFRNGMMNVCPIG 139
            .|||.||.:.||.:.||.|..|||||.::..|||.|.|:..:.:|.|||||||||:|::|:.|||
Zfish    87 AENGTVQYKDGKLIFKQAIQNHLGEELLQELINFCLSYMGLIKLPKKRGTFIEFRSGVINISPIG 151

  Fly   140 RQCTREERNMFAEYDIEHKVREKMIKDLKQEFADVDLTYSIGGQISFDVFPHGWDKTYCLRHIEA 204
            |.||.|||..|:|.|...|:|||.:..|::|||...|.::.||.||||:||.||||..||..:|.
Zfish   152 RSCTLEERIEFSEIDKREKIREKFVAALQKEFAGKGLRFTRGGLISFDIFPEGWDKRLCLDVLEQ 216

  Fly   205 HYKFKEIHFFGDKTEPGGNDYEIYSDPRTISHRVYTPKDTQRILTEI 251
            . ....|:|||::|..|||||||:.||||:...|..|.||.|:..|:
Zfish   217 E-GLDTIYFFGNETSLGGNDYEIFEDPRTVGFSVSCPADTARLCREM 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pmm2NP_648589.1 HAD_PMM 12..251 CDD:319784 120/239 (50%)
pmm1NP_001429629.1 None

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