DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sti and AT2G19400

DIOPT Version :10

Sequence 1:NP_001261768.1 Gene:sti / 39429 FlyBaseID:FBgn0002466 Length:1858 Species:Drosophila melanogaster
Sequence 2:NP_565453.1 Gene:AT2G19400 / 816459 AraportID:AT2G19400 Length:527 Species:Arabidopsis thaliana


Alignment Length:436 Identity:140/436 - (32%)
Similarity:218/436 - (50%) Gaps:93/436 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 DTLKKRDRNIAEFVNKFRPIIEETRKL--RVNADDFLIKTLIGQGYFGNVHLVVERQTNDIYAMK 142
            |..:|....:.|.:.  |...|.||.:  |:..|||.:.::||:|.||.|.|..|::|.:|||||
plant    72 DVSEKEQLELLEDLQ--RKETEYTRLMRNRLCVDDFDLLSIIGRGAFGEVRLCREKKTGNIYAMK 134

  Fly   143 KIKKSVVTT----SQVKEERDIMSIRNSEWLINLQYAFQDNDNLYLVMEYMPGGDLLSLMSRHGP 203
            |:|||.:.:    ..|:.||::::...|:.::.|.|:|||.:.|||:|||:.|||:::|:.|...
plant   135 KLKKSEMLSRGQVEHVRAERNLLAEVASDCIVKLYYSFQDPEYLYLIMEYLSGGDVMTLLMREET 199

  Fly   204 FDEDLARFYLAELTVALHTLHEMGYVHRDIKPENILIDRFGHIKLADFGNAAALD---------- 258
            ..|.:||||:|:..:|:.::|:..||||||||:|:|:|::||:||:|||....||          
plant   200 LTETVARFYIAQSVLAIESIHKHNYVHRDIKPDNLLLDKYGHMKLSDFGLCKPLDCRNISAMNVN 264

  Fly   259 ---RDGHV-----------------------------------LSLSPVGTPDYIAPELLQTIST 285
               .|.::                                   |:.|.||||||||||:|     
plant   265 EPLNDENINESIDGDENCSIGRRGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVL----- 324

  Fly   286 YKLSKSMHDVSRIVSCDYWSMGIIGYELICETTPFHEDNVHETYSKILSHCEESHLKELISFPAD 350
              |.|...     |.||:||:|.|.||::....||:.|:...|..||:|.  .:||    .||..
plant   325 --LKKGYG-----VECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVSW--RTHL----VFPEG 376

  Fly   351 LKVSVNYRNLIESLVTNPSKRL-----SYERIKNHPFFSEIPWGSIRSQVPPIIPTVRSDDDTSN 410
            .:::...|:||..|:.:...||     ..|:||.|.:|.::.|..:........|.|..:.||.|
plant   377 ARLTPEARDLICRLLCDSEHRLGSHGAGAEQIKAHTWFKDVEWEKLYEMDAAFKPVVNGELDTQN 441

  Fly   411 F----EDGIRHKTRREQGVA-KKSLTTNMKSNDFSGKDLPFIGYSF 451
            |    |.......|...|.: |.|:|.         :::.|:||::
plant   442 FMKFDEVECPKPARTGSGPSWKVSITP---------QNINFVGYTY 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stiNP_001261768.1 Protein Kinases, catalytic domain 111..452 CDD:473864 132/403 (33%)
SMC_prok_B 481..1254 CDD:274008
C1 1389..1440 CDD:410341
CNH 1509..1779 CDD:459938
AT2G19400NP_565453.1 MobB_NDR_LATS-like 39..100 CDD:439267 7/29 (24%)
STKc_NDR_like 103..479 CDD:270750 132/403 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.