DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sti and cdc42bpab

DIOPT Version :9

Sequence 1:NP_001261768.1 Gene:sti / 39429 FlyBaseID:FBgn0002466 Length:1858 Species:Drosophila melanogaster
Sequence 2:XP_021324156.1 Gene:cdc42bpab / 566003 ZFINID:ZDB-GENE-080219-17 Length:1800 Species:Danio rerio


Alignment Length:2035 Identity:448/2035 - (22%)
Similarity:770/2035 - (37%) Gaps:690/2035 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ISVRTARLNNLILGKGAGVCAKPAGSASGSGIPASTRRSIVPVSTTSAAVAEAICREGLLDAFCL 72
            :.||..:|..||:.          |.:..||                    :....|.|||....
Zfish     3 VEVRLKKLEKLIMD----------GPSQSSG--------------------QCFSMETLLDILVC 37

  Fly    73 LYNECDKDTLKKRDRNIAEFVNKFRPIIEETRKLRVNADDFLIKTLIGQGYFGNVHLVVERQTND 137
            ||:||....: :|::|:.||::..:|...:.:::|::.:||.|..:||:|.||.|.:|..:.|:.
Zfish    38 LYDECSSSPI-RREKNVLEFLDWAKPFTSKVKQMRLHKEDFEILKVIGRGAFGEVAVVKVKNTDK 101

  Fly   138 IYAMKKIKK----SVVTTSQVKEERDIMSIRNSEWLINLQYAFQDNDNLYLVMEYMPGGDLLSLM 198
            ::|||.:.|    ....|:..:||||::...:.:|:..|.|||||.:||||||:|..|||||:|:
Zfish   102 VFAMKILNKWEMLKRAETACFREERDVLVNGDCQWITTLHYAFQDENNLYLVMDYYVGGDLLTLL 166

  Fly   199 SR-HGPFDEDLARFYLAELTVALHTLHEMGYVHRDIKPENILIDRFGHIKLADFGNAAALDRDGH 262
            |: .....||:|:|||||:.:|:.::|::.||||||||:|||:|..|||:|||||:...|..||.
Zfish   167 SKFEDRLPEDMAKFYLAEMVLAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 231

  Fly   263 VLSLSPVGTPDYIAPELLQTISTYKLSKSMHDVSRIVSCDYWSMGIIGYELICETTPFHEDNVHE 327
            |.|...|||||||:||:||.:...|....       ..||:||:|:..||::...|||:.:::.|
Zfish   232 VQSSVAVGTPDYISPEILQAMEDGKGKYG-------PECDWWSLGVCMYEMLYGETPFYAESLVE 289

  Fly   328 TYSKILSH-CEESHLKELISFPADL-KVSVNYRNLIESLVTNPSKRL---SYERIKNHPFFSEIP 387
            ||.||::| ..:.:.:|...||..: .||.:.::|:..|:.:...||   ..|..|.||||:.|.
Zfish   290 TYGKIMNHKSSQPNDEERFQFPLQVTDVSEDAKDLVRRLICSREHRLGQNGIEDFKQHPFFTGID 354

  Fly   388 WGSIRSQVPPIIPTVRSDDDTSNFEDGIRHKTRREQGVAKKSLTTNMKSND-FSGKDLPFIGYSF 451
            |.:||:...|.||.|.|..|||||:        .:....|...|....|:. |||..|||:|:::
Zfish   355 WDNIRTCEAPYIPEVSSPTDTSNFD--------VDDDCLKNCETLPPPSHTAFSGHHLPFVGFTY 411

  Fly   452 VH---------MEKSAISATTDEKLQEKLKELL---------QKLKTRENEISMLKQDLLRAQQS 498
            ..         :.:|...|..|..:|..|:|.|         ::|:..:.|::...|:..:..|:
Zfish   412 TSKCTLSDRGCLRESVGPAQVDAHVQRSLEESLASEAYERRIRRLEQEKTELTRKLQESTQTVQA 476

  Fly   499 LRKTDNKSQVVADAKMEIKKLQQIIKEKTMELTTCKTQIKTLQSSAKIDEEMWSKKEATITDLLR 563
            |:..|:.:.|.|:.::||:.|              |::|                      |:|:
Zfish   477 LQYPDSDAPVNANKEVEIRSL--------------KSEI----------------------DILK 505

  Fly   564 LNRQKYEEAKIASEQRYEKQLADKKQELASTLQKLDARELEFNAKFEECKHLSMKLQNYKDMLQQ 628
                    .:||...:.|:||     |.|||.:    |:||.::|.         ::|.      
Zfish   506 --------KQIADSGQMEQQL-----ENASTAR----RDLEDSSKV---------VRNL------ 538

  Fly   629 IKEQNLKSETNHEEQRRQMAELYEQKLTDLRKKV----RDSQDTNRRMTMEIKEIRTELDESISS 689
              |:.|||.|..::      :|::: |..|.:||    ::.:|.:.:..|.|||. .||:|.:| 
Zfish   539 --EKQLKSVTQEKD------DLHKE-LLGLAEKVKAQGKELKDAHSQKKMAIKEF-AELNEQLS- 592

  Fly   690 SKSTQEAKNATERNIEEILRRLNEEIASNNELHAEKVKLETKLQLKENETQEVRAECHRLERELQ 754
                                                               :||.:..||.|:. 
Zfish   593 ---------------------------------------------------DVRTQKQRLSRQF- 605

  Fly   755 LAECRCQLAESSLATQVSPYETAPGSLTELNAIEDQLRADLLAAKESENHQKGRADQLQTL---V 816
                                                        |:.|...:|.:.:|:.|   :
Zfish   606 --------------------------------------------KDKEEEMEGVSQKLEALRLEI 626

  Fly   817 TKLEQMLERFNEQSLSPTKSHSSRKQEGETVGDMLERQNEKLEDKLAAVREQMIVERQ------- 874
            .|.|:|.:....|:    :.|::..|:...|.:..|:.:::||::|..:::.    :|       
Zfish   627 RKAERMRKELEAQA----EEHAAEAQKERKVRERTEQYSKQLEEELEGMKQL----KQTGPPNGA 683

  Fly   875 AARTANLSLWKVEKQLE-EALSEKKLLARRMELTEDRIKKVQNASDEAQRMLKTSQEETRQRESR 938
            |:......|.:|..:|| :::..::.:.||..|....:|.:|....:|:....|.|:|....:.:
Zfish   684 ASSDQQQELMRVRAELEKKSVQYEEEMCRRETLHSSEMKNLQKELRDAEGQHLTHQKEILVLKDK 748

  Fly   939 IEELKQELAAAKRDVLKEHRQWEKAEQERMKCKSEIIEHLANVHRLEQQETELRQKLRQIQSRFD 1003
            :|:.::|....:.:.:.|::|  |.|:|:.....|..:..|.|.:|..|..:|....||      
Zfish   749 LEKTRRESQVEREEFVCEYKQ--KYEREKAHLTDENKKLSAEVEKLNGQFEQLSSSHRQ------ 805

  Fly  1004 GVTLEQKNTIRELQEEREKSRKANDSCLVLQKELKQLTDNFQRLKYACSITDSQLTEVETMLKSE 1068
                                         |::|:::|.|.    |.:.:..::|:||:...:..|
Zfish   806 -----------------------------LEEEMRELADK----KESVAHWEAQITEIIQWVSDE 837

  Fly  1069 QERNKSQKSQLDTLHEKLRE-----RNDQL----TDL---RKQLTTVESEKRLAEQRAQVLASEI 1121
                |..:..|..|..|:.|     ||..|    ||:   .::...::...||..|.|  |.:||
Zfish   838 ----KDARGYLQALATKMTEELEGLRNTSLGARGTDMPWKMRRFAKLDMSARLELQSA--LDTEI 896

  Fly  1122 DELRLNLKEQQKKLVAQQDQL--VEQTNALFATQERAELLDGQNANYEAQTADSNREMVSLKEEN 1184
                     :.|:.:  ||:|  |:.||  .||:  .:|.:.::.|.|                 
Zfish   897 ---------RAKQSI--QDELNKVKATN--IATE--CKLQESESRNQE----------------- 929

  Fly  1185 ARILSELFHKKEEVGNLQAEIRGLE------SAQANLHAEIDSLQDTLAEKEQFYVQRDIKSNAT 1243
              :|.|:...::|...|:.. ||::      |..|.|:|...:|       :||           
Zfish   930 --LLGEIERLRKETEELRLR-RGVKHQDSQNSFLAFLNAPTSAL-------DQF----------- 973

  Fly  1244 LAQHKKLIDYLQLKVEDLSAKKKKTLADKLFG-SSHTNK---ENVSPNDVESSILYRALKEELKR 1304
                            |.|..         || .|.|.:   .:.:|::..|       ::|..|
Zfish   974 ----------------DRSPS---------FGPGSKTRRLDSADFTPSNTPS-------RDEDAR 1006

  Fly  1305 EQKMNSLLKEQLAQLNGTATLRSPRKSAAVNGDSDAPKQRPVSIAALPRSPQKQQQPLKRTTSQV 1369
            .:::              :..|||         |.|....|:.:  :..:.:..|.|..| :...
Zfish  1007 SRRI--------------SRSRSP---------STASDMEPIEL--IDHTSRSLQTPTGR-SGYG 1045

  Fly  1370 ELKTTAEKPTKVTIENQAHHRFELALQESKVDAVNCVVCEKAVVA----GSPFWKCKECKDVTHR 1430
            .|..::.||       :||   :.:::...| ...|..|...:|.    |.   .|:.|....|.
Zfish  1046 SLGHSSPKP-------KAH---QFSVKSFNV-PTKCNQCTSLMVGLIRQGC---TCEACSFSCHV 1096

  Fly  1431 KCRSNVQSHCGSTKPTAPSADDLSSIQSVSSLTLDSVDVAGGTTSGGEYIGSL-VYSSDGAEDQA 1494
            .|.....|.|    |.||.       |:...|   .:|...|.  |..|.|.| |....|.:...
Zfish  1097 TCADKAPSVC----PVAPD-------QTRGKL---GIDTQRGI--GTAYEGHLRVPKPTGVKKGW 1145

  Fly  1495 RKEIEVNCAF-----EVAEQQILLLGCNTGLYAYHLDSQRLVHISGLESVSCMSICKRLAKAIMV 1554
            ::...|.|.|     |:.|.:    |...|:....:...|....|              |.:::.
Zfish  1146 QRVWAVVCDFKLFLYELGEGK----GAQPGVVVNQVIDMRDEEFS--------------ASSVLE 1192

  Fly  1555 GTV---GEKLYQCDYRQLESRCQSSSSCHKPVLETSAIELPFANRTPSEKW-------------- 1602
            ..|   ..|...|.:|...|:..:|||      :.:.|.:...|.....||              
Zfish  1193 SDVIHANRKDIPCIFRVTASQLSASSS------QKTCILILADNEQERTKWVCALNELHRILRKN 1251

  Fly  1603 ----KLVLISDEAENALDSVAIAATSTRIVILKYD----------LKLHMFKP--VRALDT-ATP 1650
                :.|.:..||.::  ::.:..|:....|:.::          ..:|:.|.  :|..|. ...
Zfish  1252 KLKERFVYVPKEAYDS--TLPLIKTTQTAAIIDHERVALGNEEGLFVIHVTKDEIIRVGDVKKVH 1314

  Fly  1651 VTSIFFTRHSAIVSSDKFYEIDLDNYAAEEFVDLSDKSMESTAKCQ------------------- 1696
            ...:..|.|...|.|.:..::.|.:.|..:..::....:..|..||                   
Zfish  1315 HVELMPTEHILAVISGRNRQVCLVSMAGLDGREVDKNKVADTKNCQLLVSGVVRNVTCFCLAIKR 1379

  Fly  1697 ----------------------------------------------------------------- 1696
                                                                             
Zfish  1380 QISCFEINKSKSRHSHLVDIQAPGTVQWMALFNQQLCVGYPSGFMRYSLYGETPPASLLHPDDPT 1444

  Fly  1697 ----------PLTAVRISRQEYLLCFAEYGVFVDEFGCRSRPYDLNWVYAPTGFVYRDPFLFISH 1751
                      .|.||.||.:|.||||::..|:||..|.|||..:|.|..|||...|..|:|.:..
Zfish  1445 LAFIKTDNLDALCAVEISNKELLLCFSKIAVYVDTHGRRSRQQELMWPAAPTACCYNAPYLSVYS 1509

  Fly  1752 YQSVQIVRLHRSFSKEMASGDNASENSESPELQRVYLPHYMSTLLANSGDVNLYAVAIDQRPCN- 1815
            ..:|.:..:            |::|..::..|::|                         ||.| 
Zfish  1510 ENAVDVFDV------------NSTEWIQTIPLKKV-------------------------RPLNM 1537

  Fly  1816 -GTQKIYHLDTMQA--FKQK 1832
             |:..:..|:|::.  |:.|
Zfish  1538 DGSLNLLGLETVRLIYFRNK 1557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stiNP_001261768.1 PKc_like 111..452 CDD:304357 143/351 (41%)
S_TKc 113..383 CDD:214567 116/279 (42%)
Smc 487..1222 CDD:224117 145/769 (19%)
CNH 1503..1774 CDD:279162 64/403 (16%)
cdc42bpabXP_021324156.1 STKc_MRCK_alpha 4..419 CDD:270773 165/460 (36%)
SbcC 438..>945 CDD:223496 143/770 (19%)
KELK 535..613 CDD:318090 27/190 (14%)
DMPK_coil 887..947 CDD:117396 21/95 (22%)
C1_1 1057..1107 CDD:278556 12/60 (20%)
PH_MRCK 1117..1251 CDD:269949 31/162 (19%)
CNH 1277..1539 CDD:307087 47/298 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22988
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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