DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sti and Pdk1

DIOPT Version :10

Sequence 1:NP_001261768.1 Gene:sti / 39429 FlyBaseID:FBgn0002466 Length:1858 Species:Drosophila melanogaster
Sequence 2:NP_728471.2 Gene:Pdk1 / 38017 FlyBaseID:FBgn0020386 Length:836 Species:Drosophila melanogaster


Alignment Length:558 Identity:143/558 - (25%)
Similarity:221/558 - (39%) Gaps:157/558 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 RVNADDFLIKTLIGQGYFGNVHLVVERQTNDIYAMKKIKKSVVTTSQ----VKEERDIM-SIRNS 166
            |.:.:||:....||:|.:..|:|.|:..:...||:|..:|.::...:    :|.||::| .:.|.
  Fly   240 RRSPNDFIFGRYIGEGSYSIVYLAVDIHSRREYAIKVCEKRLILRERKQDYIKREREVMHQMTNV 304

  Fly   167 EWLINLQYAFQDNDNLYLVMEYMPGGDLLSLMSRHGPFDEDLARFYLAELTVALHTLHEMGYVHR 231
            ...:||...|||..:||.||.|...||:|..::|.|.||....|.|.|||.:|...:|....|||
  Fly   305 PGFVNLSCTFQDQRSLYFVMTYARKGDMLPYINRVGSFDVACTRHYAAELLLACEHMHRRNVVHR 369

  Fly   232 DIKPENILIDRFGHIKLADFGNAAAL--------------------------------------D 258
            |:||||||:|...|..:||||:|..:                                      |
  Fly   370 DLKPENILLDEDMHTLIADFGSAKVMTAHERALATEHCSEQRRSNSDEDDEDSDRLENEDEDFYD 434

  Fly   259 RDGHVL--------------------------SLSPVGTPDYIAPELLQT--ISTYKLSKSMHDV 295
            ||...|                          ..|.|||..|::||:||.  |:.          
  Fly   435 RDSEELDDGDDEQQQEEMDSPRHRQRRYNRHRKASFVGTAQYVSPEVLQNGPITP---------- 489

  Fly   296 SRIVSCDYWSMGIIGYELICETTPFHEDNVHETYSKILSHCEESHLKELISFPADLKVSVNYRNL 360
                :.|.|::|.|.|::|....||...|.:..:.:||. |       .:.||...  ..:..:|
  Fly   490 ----AADLWALGCIVYQMIAGLPPFRGSNDYVIFKEILD-C-------AVDFPQGF--DKDAEDL 540

  Fly   361 IESLV-TNPSKRLS-------YERIKNHPFFSEIPWGSIRSQVP----PIIPTVRSDDDTSNFED 413
            :..|: .:|..||.       ||.|:.||||:.|.|.::|.|.|    |.:|.|..|:|   |..
  Fly   541 VRKLLRVDPRDRLGAQDEFGYYESIRAHPFFAGIDWQTLRQQTPPPIYPYLPGVSQDED---FRS 602

  Fly   414 GIRHKTRREQGVAKKSLTTNMKSNDFSGKDLPFIGYSFVHMEKSAISATTDEKLQEKLKELLQKL 478
            ........|.|:.::.::..:.:....|..:.      :.:::|....:.|....|||:.|.|  
  Fly   603 SYTVPGDLEPGLDERQISRLLSAELGVGSSVA------MPVKRSTAKNSFDLNDAEKLQRLEQ-- 659

  Fly   479 KTRENEISMLKQDLLRAQQSLRKTDNKSQVVADAKMEIK-----KLQQIIKEKTMELTTCKTQIK 538
                                 :||| |..|.||.::.:|     |.:.:...|.|.|.|...::.
  Fly   660 ---------------------QKTD-KWHVFADGEVILKKGFVNKRKGLFARKRMLLLTTGPRLI 702

  Fly   539 TLQ--SSAKIDEEMWSKKEATITDLLRLNRQKYEEAKI 574
            .:.  ...|..|..||      .||    |.:|:..||
  Fly   703 YIDPVQMIKKGEIPWS------PDL----RAEYKNFKI 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stiNP_001261768.1 Protein Kinases, catalytic domain 111..452 CDD:473864 112/423 (26%)
SMC_prok_B 481..1254 CDD:274008 23/101 (23%)
C1 1389..1440 CDD:410341
CNH 1509..1779 CDD:459938
Pdk1NP_728471.2 STKc_PDK1 244..571 CDD:270733 96/350 (27%)
PH_PDK1 658..764 CDD:241293 24/107 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.