DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sti and Erc2

DIOPT Version :9

Sequence 1:NP_001261768.1 Gene:sti / 39429 FlyBaseID:FBgn0002466 Length:1858 Species:Drosophila melanogaster
Sequence 2:XP_017455492.2 Gene:Erc2 / 259269 RGDID:708372 Length:1136 Species:Rattus norvegicus


Alignment Length:1207 Identity:257/1207 - (21%)
Similarity:457/1207 - (37%) Gaps:356/1207 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 HMEKSAISATTDE---KLQEKLKELLQKLKTRENEISMLKQDLLRAQQSLRKTDNKSQVVADAKM 514
            |...|.:....|.   .||.:||||     .|||       ||||.:..::          |:| 
  Rat   133 HQVPSMLRQVRDSTMLDLQAQLKEL-----QREN-------DLLRKELDIK----------DSK- 174

  Fly   515 EIKKLQQIIKEKTMELTTCKTQIKTLQSSAKIDEEMWSKKEATITDLLRLNRQKYEEAKIASEQR 579
                           |.:....|||..|.....|.:..|:||....:|:      |:.:::.|:.
  Rat   175 ---------------LGSSMNSIKTFWSPELKKERVLRKEEAARMSVLK------EQMRVSHEEN 218

  Fly   580 YEKQLADKKQELASTLQKLDARELEFNAKFEECKHLSMKLQNYKDMLQQIKEQN--LKSETNHEE 642
                            |.||||         ..|||.:.:|..:|.|:..::.|  |:.|:.:..
  Rat   219 ----------------QLLDAR---------RTKHLQLTIQALQDELRTQRDLNHLLQQESGNRG 258

  Fly   643 QRRQMAELYEQKLTDLRKKVRDSQDTN---RRMTMEIKEIRTEL--------DESISS------- 689
            ......||.|:....|:.: .|.|...   .|.|:|..|:|.|.        ||||..       
  Rat   259 AEHFTIELTEENFRRLQAE-HDRQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQS 322

  Fly   690 ----SKSTQEAKNATER---------NIEEILRR-------LNEEIASNNELHAEKVK---LETK 731
                |||.::....|.|         ::|.||.:       |.||:...::|..|..|   |:|.
  Rat   323 KGLPSKSLEDDNERTRRMAEAESQVSHLEVILDQKEKENIHLREELHRRSQLQPEPAKTKALQTV 387

  Fly   732 LQLKENETQEVRAECHRLERELQLAECRCQLAESSLATQVSPYETAPGSLTELNAIEDQLRADLL 796
            :::|:.:...:......||.|:|:.:....|.......::...|........:....|||:.: |
  Rat   388 IEMKDTKIASLERNIRDLEDEIQMLKANGVLNTEDREEEIKQIEVYKSHSKFMKTKIDQLKQE-L 451

  Fly   797 AAKESENHQKGRADQLQTLVTKLEQMLERFNEQSLSPTKSHSSRKQEGETVGDMLERQNEK---L 858
            :.||||         |..|.||||.:           :..:|..||..|.:.:.|..:.::   |
  Rat   452 SKKESE---------LLALQTKLETL-----------SNQNSDCKQHIEVLKESLTAKEQRAAIL 496

  Fly   859 EDKLAAVREQMIVERQAARTANLSLWKVEKQLEEALSEKKLLARRMELTEDRIKKVQNASDEAQR 923
            :.::.|:|.: :.|:::      .|.|..|||::...||..||..:...:|.::..:...:..|:
  Rat   497 QTEVDALRLR-LEEKES------FLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQK 554

  Fly   924 MLKTSQEETRQRESRIEELKQELAAAKRDVLKEHRQWEKAEQERMKCKSEIIEHLANVHRLEQQE 988
            .::..||:.|.::.::..||..:.:.:.|...........| |.:..|..|||.|.     ||:|
  Rat   555 KIENLQEQLRDKDKQLTNLKDRVKSLQTDSSNTDTALATLE-EALSEKERIIERLK-----EQRE 613

  Fly   989 TELRQKLRQIQSRFDGVTLEQKNTIRELQEEREKSRKANDSCLVLQKELKQLTDNFQRLK-YACS 1052
            .:.|::|.:|:|            .|  :|.::...|.|    .||.||.:...:...|| :|.|
  Rat   614 RDDRERLEEIES------------FR--KENKDLKEKVN----ALQAELTEKESSLIDLKEHASS 660

  Fly  1053 ITDSQLTEVETMLKSEQERNKSQKSQLDTLHEKLRERNDQL-TDLRKQLTTVESEKRLAEQRAQV 1116
            :..:.|.. ::.|||.:...:.:|.:.:.|..:|:::.:|| ..:......:|.:.|:..:.|..
  Rat   661 LASAGLKR-DSKLKSLEIAIEQKKEECNKLEAQLKKQAEQLFNQMYNPAHNIEDDSRMNPEFADR 724

  Fly  1117 LASEIDELRLNLKEQQKKLVAQQDQLVEQTNALFATQERAELLDGQNANYEAQT----ADSNREM 1177
            | .::|:.....:::..|..|:.|:|:|   .|...:......|.:.|..|:.|    .|.|:::
  Rat   725 L-KQLDKEASYYRDECGKAQAEVDRLLE---ILKEVENEKNDKDKKIAELESLTLRHMKDQNKKV 785

  Fly  1178 VSL-------KEENARILSELFHKKEEV----GNLQAE--IRGLESAQANL---HAEIDSLQDTL 1226
            .:|       |::||::|.|:..:::.:    .:||.|  :..||..:..|   .|.:.|.|.:|
  Rat   786 ANLKHNQQLEKKKNAQLLEEVRRREDSMVDNSQHLQIEELMNALEKTRQELDATKARLASTQQSL 850

  Fly  1227 AEKEQFYVQRDIKSNATLAQHKKLIDYLQLKVE----------------DLSA-KKKKTLADKLF 1274
            ||||...      :|..:.:.|:|.:.|::|.|                :||| |||||      
  Rat   851 AEKEAHL------ANLRMERRKQLEEILEMKQEALLAAISEKDANIALLELSASKKKKT------ 903

  Fly  1275 GSSHTNKENVSPNDVESSILYRALKEELKREQKMNSLLKEQLAQLNGTATL-RSPRKSAAVNGDS 1338
                  :|.|.....|...|...||:::.|.:|     :...:.:..|... .||..:|..:|.|
  Rat   904 ------QEEVMALKREKDRLVHQLKQQVYRPRK-----QPPCSNIPCTCDAGYSPDFTAKYHGSS 957

  Fly  1339 -DAPKQRPVSIAALPRSPQKQQQPLKRTTSQVELKTTAEKPTKVTIENQAHHRFELALQESKVDA 1402
             ||...                   :|:.:|..:|..|:.      .:..||.:.          
  Rat   958 YDAYMG-------------------QRSQTQNRMKLMADN------YDDDHHHYH---------- 987

  Fly  1403 VNCVVCEKAVVAGSPFWKCKECKDVTHRKCRSNVQSHCGSTKPTAPSADDLSSIQSVSSLTLDSV 1467
                                  ....|...||..:|...:.:   ||.|.||             
  Rat   988 ----------------------HHHHHHHHRSPGRSQHSNHR---PSPDQLS------------- 1014

  Fly  1468 DVAGGTTSGGEYIGSLVYSSDGAEDQARKEIEVNCAFEVAEQQILLLGCNTGLYAYHLDSQRLVH 1532
                                    :...|.|..:|:      .:|::.|:..|:..:    :.:|
  Rat  1015 ------------------------EGLAKRIAQHCS------DVLIIYCSLALFFVY----QWLH 1045

  Fly  1533 ISGLE------SVSCMSICKRLAKAIMVGTVGEKLYQ 1563
            .:|.:      |:|| ||  |.::.:.:|..|:..|:
  Rat  1046 AAGRKGREFSLSLSC-SI--RFSETVPIGCTGKTEYE 1079

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stiNP_001261768.1 PKc_like 111..452 CDD:304357
S_TKc 113..383 CDD:214567
Smc 487..1222 CDD:224117 176/802 (22%)
CNH 1503..1774 CDD:279162 14/67 (21%)
Erc2XP_017455492.2 Cast 151..924 CDD:401982 211/917 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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