DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sti and rock1

DIOPT Version :9

Sequence 1:NP_001261768.1 Gene:sti / 39429 FlyBaseID:FBgn0002466 Length:1858 Species:Drosophila melanogaster
Sequence 2:XP_002934180.3 Gene:rock1 / 100496057 XenbaseID:XB-GENE-984661 Length:1360 Species:Xenopus tropicalis


Alignment Length:1666 Identity:406/1666 - (24%)
Similarity:685/1666 - (41%) Gaps:483/1666 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LLDAFCLLYNECDKDTLKKRDRNIAEFVNKFRPIIEETRKLRVNADDFLIKTLIGQGYFGNVHLV 130
            |||....:..:.|...::| ::||..|:|:::..:.:.|.||:.|||:.:..:||:|.||.|.||
 Frog    30 LLDGLDAMVYDLDFPAMRK-NKNIDNFLNRYKDTMSKVRDLRMKADDYEVVKVIGRGAFGEVQLV 93

  Fly   131 VERQTNDIYAMKKIKK-SVVTTSQVK---EERDIMSIRNSEWLINLQYAFQDNDNLYLVMEYMPG 191
            ..:.:..:||||.:.| .::..|...   ||||||:..||.|::.|.|||||:..||:|||||||
 Frog    94 RHKSSRKVYAMKLLSKLEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 158

  Fly   192 GDLLSLMSRHGPFDEDLARFYLAELTVALHTLHEMGYVHRDIKPENILIDRFGHIKLADFGNAAA 256
            |||::|||.: ...|..||||.||:.:||..:|.||::|||:||:|:|:|:.||:||||||....
 Frog   159 GDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 222

  Fly   257 LDRDGHVLSLSPVGTPDYIAPELLQTISTYKLSKSMHDVSRIVSCDYWSMGIIGYELICETTPFH 321
            ::|:|.|...:.|||||||:||:|::        ...|......||:||:|:..||::...|||:
 Frog   223 MNREGMVRCDTAVGTPDYISPEVLKS--------QGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279

  Fly   322 EDNVHETYSKILSHCEESHLKELISFPADLKVSVNYRNLIESLVTNPSKRL---SYERIKNHPFF 383
            .|::..|||||::|      |..::||.|..:|...:|||.:.:|:...||   ..|.||.||||
 Frog   280 ADSLVGTYSKIMNH------KNSLTFPEDSDISKEAKNLICAFLTDREVRLGRNGVEEIKRHPFF 338

  Fly   384 --SEIPWGSIRSQVPPIIPTVRSDDDTSNFEDGIRHKTRREQGVAKKSLTTNMKSNDFSGKDLPF 446
              .:..|.::|..|.|::|.:.||.|||||:|....|...|.....|:         |.|..|||
 Frog   339 KNDQWAWETLRDTVAPVVPDLTSDIDTSNFDDLEEDKGDEETFPIPKA---------FVGNQLPF 394

  Fly   447 IGYSF-----------VHMEKSAISATTDEKLQEKLKELLQKLKTR-ENEISMLKQDLLRAQQSL 499
            :|:::           .:...:..|:|.|:.|.|.|::.:.:|:.: .||:.:            
 Frog   395 VGFTYYSNRQYLDDPSANPNDNRSSSTVDKNLVENLQKNIYQLEEQLHNEMQL------------ 447

  Fly   500 RKTDNKSQVVADAKMEIKKLQQIIKEKTMELTTCKTQIKTLQSSAKIDEEMWSKKEATITDLLRL 564
                 |.::....:|...||.:|:||                    :|||.              
 Frog   448 -----KDEMEQKCRMSNIKLDKIMKE--------------------LDEEG-------------- 473

  Fly   565 NRQKYEEAKIASEQRYEKQLADKKQELASTLQKLDARELEFNAKFEECKHLSMKLQNYKDMLQQI 629
            |::|..|:.:|..::.:..|..:..|.....::          :.|:.:::..::...||.|:..
 Frog   474 NQRKNLESLVAQTEKEKIMLQHRINEYQRKAEQ----------ESEKRRNVENEVSTLKDQLEDF 528

  Fly   630 KEQNLKSETNHEEQRRQMAELYEQKLTDLRKKVRDSQDTNRRMTMEIKEIRTELDESISSSKS-T 693
            |:   .|:|:|         :..:|:..|:|::.::.|.          :|||.|.::...|| |
 Frog   529 KK---ISQTSH---------ITNEKIAQLQKQLEEANDL----------LRTESDTAVRLRKSQT 571

  Fly   694 QEAKNATERNIEEILRRLNEEI--------ASNNELHAEKVKLETKLQLKENETQ-------EVR 743
            :.:|..::      |..||.|:        :|.:::..:...|:..|..:..:..       :::
 Frog   572 EMSKTVSQ------LEALNRELQDRCRLLESSKSQVEKDYFHLQAALDSERRDRSQGSEMIGDLQ 630

  Fly   744 AECHRLERELQLAECRCQLAESSLATQVSPYETAPGSLTELNAIEDQLRADLL--AAKESENHQK 806
            |....|:.||:..:...::|||                      |.:...|||  :.||..|.:.
 Frog   631 ARMASLQEELKHVKNNLEMAES----------------------ERKRAQDLLNNSEKEKNNLEI 673

  Fly   807 GRADQLQTLVTKLEQMLER-FNEQSLSPTKSH-SSRKQEGETVGDMLERQNEKLEDKLAAVRE-Q 868
            ....||:|    |:||||: .||..:  ||:. |.|.|..|             |:|..|:.| :
 Frog   674 DLNYQLKT----LQQMLEQEINEHKV--TKARLSDRHQSFE-------------EEKSVAMCEME 719

  Fly   869 MIV--ERQAARTANLSLWKVEKQ---LEEALSEKKLLARRMELTEDRIKKVQNASDEAQRMLKTS 928
            |.|  ||.|...|.....::|||   ||..|.:.:                       |:|    
 Frog   720 MKVKGERAAKEKAENRRVEIEKQCSMLEFDLKQSR-----------------------QKM---- 757

  Fly   929 QEETRQRESRIEELKQELAAAKRDVLKEHRQWEKAEQERMKCKSEIIEHLANVHRLEQQETELRQ 993
            :..|:|||...||:||...           |.|...::|:..::|:.:|...|..|:..|.:|:|
 Frog   758 EHFTQQRERLEEEVKQLTL-----------QLEHETKKRIVTQNELNQHAGLVDTLKGSEKQLKQ 811

  Fly   994 KLRQIQSRFDGVTLEQKNTIRELQEEREKSRKANDSCLVLQKELKQLTDNFQRLKYACSITDSQL 1058
            ::               ||:.|.:.             :|:.||.|||..::.       .:.|:
 Frog   812 EI---------------NTLLEAKR-------------LLEFELGQLTKQYRG-------NEGQM 841

  Fly  1059 TEVETMLKSEQERNKSQKSQLDTLHEKLRERNDQLTDLRKQL-------TTVESEKRLAEQRA-- 1114
            .|::..|::||..:...|:|:..|.|::.|:.....:|.|::       .|:.::..|||.:|  
 Frog   842 RELQDQLEAEQYFSTLYKTQVRELKEEVEEKTKHSHELEKRVHELYNDKDTLTAQLDLAETKAES 906

  Fly  1115 -QVLASEIDELRLNLKEQQKKLVAQ--QD--------QLVEQTNALFATQERAELLDGQNANYEA 1168
             |:..:.::|....:.::.|||.|:  ||        :.:|:||:....              :.
 Frog   907 EQLARTLLEEQYFEVNQENKKLSARSWQDNTEKDHTIRKLEETNSTLTK--------------DV 957

  Fly  1169 QTADSNREMVSLKEENARILSELF-HKKEEVGNLQAEI-------RGLESAQANLHAEIDSLQD- 1224
            ||.....|.:|   |.||.|.:.: .|:||:.||:...       :.|::...|..|||.:.:| 
 Frog   958 QTLTKANEELS---EKARKLEQEYKEKEEEIYNLRNSYEKAINTEKTLKTQAVNKLAEIMNRKDF 1019

  Fly  1225 ------------TLAEKEQFYVQRDI-----KSNATLAQHKKLID--YLQLKVE---------DL 1261
                        ...|||...:|.|:     |.|..:|:::|.:|  .:||..|         .|
 Frog  1020 KLDRKKANTQDLRKKEKENRKLQLDLNQEKEKYNQMVAKYQKELDETLMQLTEESNYKNELQMQL 1084

  Fly  1262 SAKK------KKTLADKLFGSSHTNKENVSPNDVESSILYRALKEELKREQKMNSL---LKEQLA 1317
            .:|:      :..|||.......|:..::.|:|.:..|....::..|....:.|..   .|:|..
 Frog  1085 DSKESDIEQLRARLADLQLRMDSTSVASLQPDDTDGIIGESRIEGWLSIPNRGNIKRYGWKKQYV 1149

  Fly  1318 QLNGTATLRSPRKSAAVNGDSDAPKQRP----------------------VSIAALPRSPQKQQQ 1360
            .:       |.:|....|.:.:..:..|                      .:...:||..|....
 Frog  1150 VV-------SSKKILFYNDEQNKEQSSPSMVLDIDKLFHVRAVTQGDVYRANTEEIPRIFQILYA 1207

  Fly  1361 PLKRTTSQVELKTTAEKPTKVTIENQAHHRFELALQESKVDAVNCVVCEKAVVAGSPFW------ 1419
            ........|||: ..::..|....|...|.|...|...   ..||..|.|      |.|      
 Frog  1208 NEGECRKDVELE-PVQQTEKTNFLNHKGHEFIPTLYHF---PANCEACAK------PLWHVFKPP 1262

  Fly  1420 ---KCKECKDVTHRKCRSNVQSHCGSTKPTAPSADDLSSIQSVSSLTLDSVDVAGGTTSGGEYIG 1481
               :|:.|    |.||..                |.|...:.:.|....|.||            
 Frog  1263 PALECRRC----HVKCHK----------------DHLDKKEELISPCKVSYDV------------ 1295

  Fly  1482 SLVYSSDGAEDQARKEIEVNCAFEVAEQQILLLGCNTGLYAYHLDSQRLVHISGLESVSCMSICK 1546
                                    .:.:.:|||.|.        ..::...:|.|        .|
 Frog  1296 ------------------------TSARDMLLLACT--------QEEQTKWVSHL--------VK 1320

  Fly  1547 RLAKAIMVGTVGEKLYQCDYRQLESRCQSSSSCHKPVLETS 1587
            ::.|     |....|.:.:.|.:.:|..::.|..||...:|
 Frog  1321 KIPK-----TPPPTLVRGNQRTMSTRSSTNQSFRKPAKTSS 1356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stiNP_001261768.1 PKc_like 111..452 CDD:304357 145/360 (40%)
S_TKc 113..383 CDD:214567 119/276 (43%)
Smc 487..1222 CDD:224117 164/788 (21%)
CNH 1503..1774 CDD:279162 16/85 (19%)
rock1XP_002934180.3 STKc_ROCK1 2..406 CDD:270772 158/400 (40%)
Smc <424..1107 CDD:224117 189/902 (21%)
HR1_ROCK1 491..556 CDD:212029 14/96 (15%)
ROCK_SBD 838..918 CDD:409019 19/79 (24%)
PH_ROCK 1125..1231 CDD:269948 15/113 (13%)
C1_ROCK1 1228..1296 CDD:410424 21/132 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.