Protein Alignment Lmx1a and Lim1

DIOPT Version :10

• Sequence 1: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: XP_309513.4
• Gene: Lim1 / 1270792
• VectorBaseID: AGAMI1_014571
• Length: 500
• Species: Anopheles gambiae
• Alignment Length: 387
• Identity: 112/387 - (28%)
• Similarity: 157/387 - (40%)
• Gaps: 133/387 - (34%)

  Fly   275 CEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKMDYDRLFGVKCSSCCH 339
            |.||.:.|.|:||:||.:..||..|:.||.|...|...|:.|.|||||:.|:.|.:|.|||.|..
Mosquito    27 CAGCNKPILDKFLLNVLERGWHATCVRCCECHQPLADKCFSRESKLYCRNDFFRRYGTKCSGCGQ 91

  Fly   340 AILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQ-FMLRDGQLFCY--------RHDLEKEMF 395
            .|.|.:||.:| .:.||||.||.|..||..:..||| ::|.|.:..|.        .|.:...:.
Mosquito    92 GIAPSDLVRKP-RDKVFHLNCFTCCICRKQISTGEQLYVLDDNKFICKDDYILGKGPHPMTDSLM 155

  Fly   396 LAAAAAQHCGFVGLDEEDLLRP------------------------------------------- 417
            .:|:..:       ||||.:||
Mosquito   156 GSASEDE-------DEEDQMRPGVLAGLVSGGAGAAGLHHGDGPLGASDLSVQSMSTDSKTGHDD 213

  Fly   418 ----------------------RDGRRGPKR--PRTILTSQQRKQFKASFDQSPKPCRKVREALA 458
                                  .|...|.||  |||.:.::|.:..|.:|.|:|||.|.:||.||
Mosquito   214 SDQGSLDGDPDCRGDSQAENKSPDDGAGSKRRGPRTTIKAKQLEVLKNAFSQTPKPTRHIREQLA 278

  Fly   459 KDTGLSVRVVQVWFQNQRAKMKKIQRKAKQNGGSG-----GGSGSGRGTGNSSATDDKDTNDKED 518
            |:|||.:||:||||||:|:|    :|:.||....|     ||:...||...:.:.
Mosquito   279 KETGLPMRVIQVWFQNKRSK----ERRLKQLTSMGRGPFFGGARKMRGFPMNLSP---------- 329

  Fly   519 KCVKQELGG-DSSGYL-----GGLDSTFASQPLNPN-------------LPF----SPDDYP 557
                   || |..|:.     |..|..:...|.:|:             :||    .|.|:|
Mosquito   330 -------GGLDEPGFPYFAADGKFDFGYGGPPFHPHDAPFFGGHPGAGPMPFGGPGGPMDHP 384

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757	24/51 (47%)
		LIM	333..388	CDD:413332	24/63 (38%)
		Homeodomain	425..481	CDD:459649	31/57 (54%)
Lim1	XP_309513.4	None