DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH2 and cah-6

DIOPT Version :10

Sequence 1:NP_648555.1 Gene:CAH2 / 39390 FlyBaseID:FBgn0027843 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_491189.1 Gene:cah-6 / 189049 WormBaseID:WBGene00000284 Length:319 Species:Caenorhabditis elegans


Alignment Length:262 Identity:68/262 - (25%)
Similarity:108/262 - (41%) Gaps:43/262 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GKHQSPINIDQVSAVEKKFPKLEFFNFKVVPDN---LQMTNNGHTVLVKMSYNEDEIPSVRGGPL 109
            |:.||||:|  |..:......|:..:|:|..::   .:..|:|:::.:....|..|         
 Worm    65 GRTQSPIDI--VPVITAFGEHLQNAHFEVTYESTGEFKAVNDGNSIWLMREGNSSE--------- 118

  Fly   110 AEKTPLGYQF---EQFH-----FHWGENDTIGSEDLINNRAYPAELHVVLRNLEYPDFASALDKD 166
                 |...|   ||:|     |||......|||..|....|..|:|::.||..:...|.||.:.
 Worm   119 -----LAISFLPEEQYHLDAVNFHWATEPMNGSEHTIGGVGYAGEMHLIHRNTRFATMADALKQP 178

  Fly   167 HGIAVMAFFFQVGDKSTGGYEGFTNLLSQIDRKGK-----SVNMTNPLPLGEYISKSVESYFSYT 226
            :|:..:|.|..........:....|||.|:..||.     |.:.....|:.|    ..:.::.|.
 Worm   179 NGVIAIAVFLNESHDDNAVFSPLINLLPQVIYKGSECKLCSFDFQTFFPVAE----KTKEFWMYE 239

  Fly   227 GSLTTPPCSEEVTWIDFTTPIDITEKQLNAFRLLTAN--DDHLKNN-----FRPIQPLNDRTLYK 284
            ||.||.|..|.|.||.....:.|:..||:..|.:.|.  |:...:.     .||||..:.||:..
 Worm   240 GSETTDPFRETVNWIVIRAALPISSHQLDKLREVRAGRYDEEFSDKVPMKPLRPIQNPSSRTIQS 304

  Fly   285 NY 286
            ::
 Worm   305 SF 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH2NP_648555.1 Carb_anhydrase 34..286 CDD:459707 68/260 (26%)
cah-6NP_491189.1 alpha_CARP_receptor_like 56..304 CDD:239396 68/258 (26%)

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