DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH2 and cah-1

DIOPT Version :10

Sequence 1:NP_648555.1 Gene:CAH2 / 39390 FlyBaseID:FBgn0027843 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_001309492.1 Gene:cah-1 / 186231 WormBaseID:WBGene00000279 Length:303 Species:Caenorhabditis elegans


Alignment Length:314 Identity:90/314 - (28%)
Similarity:134/314 - (42%) Gaps:57/314 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CRNTPFAIVIAPILICASLVLAQDFGYEGRH------GPEHW---SEDYARC-SGKHQSPINIDQ 58
            |.:.|..::   ||.|....|.....|:..:      ||..|   .:|:..| .|:.||||:|. 
 Worm     5 CSHFPLFLI---ILTCHISPLKSSQNYQWSYDSDVFGGPHFWGLVEKDWWMCKKGRLQSPIDIQ- 65

  Fly    59 VSAVEKKFPKLEFFNFKVVPDNL-------QMTNNGHTVLVKMSYNEDEIPSVR--GGPLAEKTP 114
                    |....|:..|.|..|       :..|.|..|.|::.|:..: |||.  .|||     
 Worm    66 --------PDRLLFDASVKPVRLDKLPVVSEFVNTGQMVRVRIGYSSKK-PSVNITSGPL----- 116

  Fly   115 LGYQF--EQFHFHWGENDTIGSEDLINNRAYPAELHVVLRNLE-YPDFASALDKDHGIAVMAFFF 176
            .||::  ::..||.|..:..|||..||.|.:|.|:.:|..|.: ||:|.||....||||:::...
 Worm   117 YGYRYRVQRIDFHMGRKNENGSEHTINGRRFPMEVQLVAYNTDLYPNFTSASKSPHGIAILSVLV 181

  Fly   177 QVGDKSTGGYEGFTNLLSQIDRKGKSVNMTN--P---LPLGEYISKSVESYFSYTGSLTTPPCSE 236
            ..|.::.......|...:.|..|.:.|.:.:  |   ||.       .....:|.||||:|.|.|
 Worm   182 DFGPETNQELIKLTIATASISYKDQRVQLADFEPWRLLPF-------TRDIITYEGSLTSPGCHE 239

  Fly   237 EVTWIDFTTPIDITEKQLNAFRLLTANDDHLKN-----NFRPIQPLNDRTLYKN 285
            .||||....||.|.::....:..|..:.:..:.     |||.||..|:|.:..|
 Worm   240 TVTWIILNQPIFIKKEHFEEWSHLYLSMEGAEKVPVAPNFRKIQETNNRLVRTN 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH2NP_648555.1 Carb_anhydrase 34..286 CDD:459707 83/284 (29%)
cah-1NP_001309492.1 alpha_CARP_X_XI_like 39..295 CDD:239395 83/277 (30%)

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