DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5906 and AT5G19750

DIOPT Version :10

Sequence 1:NP_648518.1 Gene:CG5906 / 39343 FlyBaseID:FBgn0036217 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_197476.1 Gene:AT5G19750 / 832095 AraportID:AT5G19750 Length:288 Species:Arabidopsis thaliana


Alignment Length:149 Identity:43/149 - (28%)
Similarity:73/149 - (48%) Gaps:11/149 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LSMVGDTMEQSYERLIGELPDWNRTRTIRMGISGL-TVGLVCHYWYQHLDYLFPKRTYKVVVVKI 101
            |::|||.:.|   ..|.:....::.||:.....|| .||...|:||.:|..:.........|:::
plant   137 LNLVGDLICQ---LTINKTSSLDKKRTLTFTFLGLGLVGPTLHFWYLYLSKVVTASGLSGAVIRL 198

  Fly   102 LLDQFICSPFYIAVFFLTMAILE---DNTWEELEQEIREKALVLYAAEWTVWPLAQFINFLLIKP 163
            |||||:.:|.::.||...:..||   .|...:|:||.....:    |.|.:|...||:||..:..
plant   199 LLDQFVFAPIFVGVFLSAVVTLEGKPSNVIPKLQQEWTGAMI----ANWQLWIPFQFLNFRFVPQ 259

  Fly   164 QYRVFYDNTISLGYDIYTS 182
            .|:|...|.::|.:::..|
plant   260 NYQVLASNVVALAWNVILS 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5906NP_648518.1 Mpv17_PMP22 121..182 CDD:461182 17/63 (27%)
AT5G19750NP_197476.1 LbR-like <21..>69 CDD:248061
Mpv17_PMP22 220..278 CDD:461182 17/61 (28%)
Blue background indicates that the domain is not in the aligned region.

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