DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5906 and AT4G33905

DIOPT Version :10

Sequence 1:NP_648518.1 Gene:CG5906 / 39343 FlyBaseID:FBgn0036217 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_567940.1 Gene:AT4G33905 / 829534 AraportID:AT4G33905 Length:261 Species:Arabidopsis thaliana


Alignment Length:164 Identity:43/164 - (26%)
Similarity:66/164 - (40%) Gaps:19/164 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ISVGLSMVGDTMEQSYERLIGELPDWNRTRTIRMGISGLTV-GLVCHYWYQHLDYLFPKRTYKVV 97
            |.:...:...|:.|:      .:..::..||.|||..||.: |...|||:..:..|||||.....
plant   105 IYIAADLSSQTIPQA------SVDSYDLVRTARMGGYGLLILGPTLHYWFNLMSSLFPKRDLITT 163

  Fly    98 VVKILLDQFICSPFYIAVFFLTMAILEDNTWEELEQEIREKAL------VLYAAEWTVWPLAQFI 156
            ..|:.:.|.:..|....|||...|.|:.....|:...::...|      |:|      |||..||
plant   164 FKKMAMGQTVYGPAMNVVFFSLNAALQGENGSEIVARLKRDLLPTMLNGVMY------WPLCDFI 222

  Fly   157 NFLLIKPQYRVFYDNTISLGYDIYTSQVKYRKKP 190
            .|.......:....|:.|..:.||.:.:..|..|
plant   223 TFKFCPVYLQPLVSNSFSYLWTIYITYMASRATP 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5906NP_648518.1 Mpv17_PMP22 121..182 CDD:461182 16/66 (24%)
AT4G33905NP_567940.1 Mpv17_PMP22 187..247 CDD:461182 15/65 (23%)

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