DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5906 and AT2G42770

DIOPT Version :10

Sequence 1:NP_648518.1 Gene:CG5906 / 39343 FlyBaseID:FBgn0036217 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_565983.1 Gene:AT2G42770 / 818877 AraportID:AT2G42770 Length:232 Species:Arabidopsis thaliana


Alignment Length:170 Identity:52/170 - (30%)
Similarity:74/170 - (43%) Gaps:32/170 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LSMVGDTMEQ--------------SYERLIGEL------PDWNRTRTIRMGISG-LTVGLVCHYW 81
            |:..|||:.|              |.|...|||      .||  .|.:||...| |..|...:.|
plant    65 LTFTGDTIAQLSGRWKKRTALKQSSSELDEGELWNIFSEHDW--IRALRMSSYGFLLYGPGSYAW 127

  Fly    82 YQHLDYLFPKRTYKVVVVKILLDQFICSPFYIAVFFLTMAILEDNTW----EELEQEIREKALVL 142
            ||.||:..||.|...:|:|:||:|.|..|..|||.|..     :|.|    .||..:.::.||..
plant   128 YQFLDHSLPKPTATNLVLKVLLNQVILGPSVIAVIFAW-----NNLWLGKLSELGNKYQKDALPT 187

  Fly   143 YAAEWTVWPLAQFINFLLIKPQYRVFYDNTISLGYDIYTS 182
            ....:..|.....:||.::..|.||.:.:..|:.::.|.|
plant   188 LLYGFRFWVPVSILNFWVVPLQARVAFMSMGSVFWNFYLS 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5906NP_648518.1 Mpv17_PMP22 121..182 CDD:461182 14/64 (22%)
AT2G42770NP_565983.1 Mpv17_PMP22 173..227 CDD:461182 12/53 (23%)

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