DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5906 and PXMP2

DIOPT Version :10

Sequence 1:NP_648518.1 Gene:CG5906 / 39343 FlyBaseID:FBgn0036217 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_061133.1 Gene:PXMP2 / 5827 HGNCID:9716 Length:195 Species:Homo sapiens


Alignment Length:174 Identity:41/174 - (23%)
Similarity:77/174 - (44%) Gaps:18/174 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 KYLLF-------TNIGISVGLSMVGDTMEQSYERLIGELPDWNRTRTIRMG------ISG-LTVG 75
            :||||       |....|..||.:|:.:.|..|:...:    ..:|::.:|      :.| ...|
Human    24 QYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKK----ENSRSLDVGGPLRYAVYGFFFTG 84

  Fly    76 LVCHYWYQHLDYLFPKRTYKVVVVKILLDQFICSPFYIAVFFLTMAILEDNTWEELEQEIREKAL 140
            .:.|::|..:::..|.......:.::|||:.:.:|.::.:|||.|..||.........::|....
Human    85 PLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDASAFAAKMRGGFW 149

  Fly   141 VLYAAEWTVWPLAQFINFLLIKPQYRVFYDNTISLGYDIYTSQV 184
            ......|.||...||||...:..::||.:.|..:|.:..|.:.:
Human   150 PALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLASL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5906NP_648518.1 Mpv17_PMP22 121..182 CDD:461182 15/60 (25%)
PXMP2NP_061133.1 Mpv17_PMP22 130..191 CDD:461182 15/60 (25%)

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