DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5906 and pxmp2

DIOPT Version :10

Sequence 1:NP_648518.1 Gene:CG5906 / 39343 FlyBaseID:FBgn0036217 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001004607.1 Gene:pxmp2 / 447868 ZFINID:ZDB-GENE-040912-184 Length:194 Species:Danio rerio


Alignment Length:186 Identity:46/186 - (24%)
Similarity:90/186 - (48%) Gaps:16/186 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MTNAMDRFHQIAFSPKYLLFTNIGISVGLSMVGDTMEQ--SYERLIGELPDWNRTR-------TI 65
            :..|:.::  ::...||.:.|....|..||.:|:.:.|  .|::.:.|    |..:       .:
Zfish    14 LARALQQY--LSLLKKYPIITKSVTSGILSALGNLLSQVLEYQKNVKE----NSPKKKISILGPV 72

  Fly    66 RMGISGLTV-GLVCHYWYQHLDYLFPKRTYKVVVVKILLDQFICSPFYIAVFFLTMAILEDNTWE 129
            ...|.||.: |.|.||:|..|:.|.|......::.::||::.|.:|.::.:|::.|..||..|..
Zfish    73 HFAIYGLFITGPVSHYFYHLLEVLLPTTVPYCLIKRLLLERLIFAPAFLLLFYVVMNALEGKTLA 137

  Fly   130 ELEQEIREKALVLYAAEWTVWPLAQFINFLLIKPQYRVFYDNTISLGYDIYTSQVK 185
            :::.:::..........|.||...||||...:..|:||.:.|.::|.:..|.:.|:
Zfish   138 DVQNKLKTSYWPAMKMNWKVWTPFQFININYVPVQFRVLFANMVALFWYAYLASVR 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5906NP_648518.1 Mpv17_PMP22 121..182 CDD:461182 16/60 (27%)
pxmp2NP_001004607.1 Mpv17_PMP22 129..190 CDD:461182 16/60 (27%)

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