DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5906 and mpv17l2

DIOPT Version :10

Sequence 1:NP_648518.1 Gene:CG5906 / 39343 FlyBaseID:FBgn0036217 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001002567.1 Gene:mpv17l2 / 436840 ZFINID:ZDB-GENE-040718-306 Length:199 Species:Danio rerio


Alignment Length:172 Identity:68/172 - (39%)
Similarity:97/172 - (56%) Gaps:4/172 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FSPKYLLFTNIGISVGLSMVGDTMEQSYE--RLIGELPDWNRTRTIRMGISGLTVGLVCHYWYQH 84
            |..::|:.||.....|:...||.::|:.|  |..|...||:||..  |...|.::|...|||||.
Zfish    21 FRGRFLIVTNTVSCGGMLAAGDLIQQTREIRRTPGRTRDWSRTGC--MFAVGCSMGPFMHYWYQW 83

  Fly    85 LDYLFPKRTYKVVVVKILLDQFICSPFYIAVFFLTMAILEDNTWEELEQEIREKALVLYAAEWTV 149
            ||..|.......|..|:|:||.:.||...|.:||.|.::|.:|:.|.:||.|:|....|.|:|.|
Zfish    84 LDKYFIGNGINNVCKKVLVDQLVASPTLGAWYFLGMGMMEGHTFIEAQQEFRDKFWEFYKADWCV 148

  Fly   150 WPLAQFINFLLIKPQYRVFYDNTISLGYDIYTSQVKYRKKPE 191
            ||.||.|||..:.|::||.|.|.::||:|.|.|.:|:|...|
Zfish   149 WPAAQMINFYFLPPKFRVLYVNIVTLGWDTYLSYLKHRDTVE 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5906NP_648518.1 Mpv17_PMP22 121..182 CDD:461182 27/60 (45%)
mpv17l2NP_001002567.1 Mpv17_PMP22 120..181 CDD:461182 27/60 (45%)

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