DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5906 and SPOM_SPAC3G6.05

DIOPT Version :10

Sequence 1:NP_648518.1 Gene:CG5906 / 39343 FlyBaseID:FBgn0036217 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_594971.1 Gene:SPOM_SPAC3G6.05 / 2543194 PomBaseID:SPAC3G6.05 Length:206 Species:Schizosaccharomyces pombe


Alignment Length:162 Identity:43/162 - (26%)
Similarity:76/162 - (46%) Gaps:15/162 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 GISVGLSMVGDTMEQSYER-LIG----------ELPDWNRTRTIRMGISGLTVGLVCHYWYQHLD 86
            |||..::. |.|:.|:.:. :||          |:|  :..|.::....|..:......|.:.|.
pombe    30 GISDAVAQ-GLTIYQTNKNAMIGLDGVRLNTHPEIP--SIKRVLQFVTFGFAISPFQFRWLRLLS 91

  Fly    87 YLFPKRTYKVVVVK-ILLDQFICSPFYIAVFFLTMAILEDNTWEELEQEIREKALVLYAAEWTVW 150
            ..||.....:.||| :||||.:.:||..|.||..|.:.|...:.....:::........|.:.||
pombe    92 AKFPIEKGAINVVKRVLLDQAVFAPFGTAFFFSWMTLAEGKGFRGAYDKLQAVFWPTLKANYMVW 156

  Fly   151 PLAQFINFLLIKPQYRVFYDNTISLGYDIYTS 182
            |..|.:||.|:..||::.:..|:::.::|:.|
pombe   157 PFFQTVNFWLMPLQYQMPFACTVAIFWNIFLS 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5906NP_648518.1 Mpv17_PMP22 121..182 CDD:461182 13/60 (22%)
SPOM_SPAC3G6.05NP_594971.1 Mpv17_PMP22 127..188 CDD:461182 13/60 (22%)

Return to query results.
Submit another query.