DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5906 and Mpv17l

DIOPT Version :10

Sequence 1:NP_648518.1 Gene:CG5906 / 39343 FlyBaseID:FBgn0036217 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001389007.1 Gene:Mpv17l / 100362572 RGDID:2324483 Length:194 Species:Rattus norvegicus


Alignment Length:168 Identity:47/168 - (27%)
Similarity:74/168 - (44%) Gaps:25/168 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WRRMTNAMDRFHQIAFSPKYLLFTNIGISVGLSMVGDTMEQSYERLIGELPDWNRTRTIRMGISG 71
            ||....|..|         |...||:.:..||...||.::|   ||.|...||.:||.:      
  Rat     5 WRAFPRAARR---------YPWPTNVLLYAGLFSAGDALQQ---RLRGGPADWRQTRRV------ 51

  Fly    72 LTVGLVCH-----YWYQHLDYLFPKRTYKVVVVKILLDQFICSPFYIAVFFLTMAILEDNTWEEL 131
            .|:.|..|     .|.:.|:...|.|..:.|:.|:|.||.:..|..::.|::.|:||:..  :::
  Rat    52 ATLALTFHGNFNYMWLRLLERALPGRAPRTVLAKVLCDQTVGGPVALSAFYVGMSILQGK--DDI 114

  Fly   132 EQEIREKALVLYAAEWTVWPLAQFINFLLIKPQYRVFY 169
            ..::|:|....|......||..|..||.|:...:|..|
  Rat   115 FLDLRQKFWNTYKTGLMYWPFVQLTNFSLVPVNWRTAY 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5906NP_648518.1 Mpv17_PMP22 121..182 CDD:461182 13/49 (27%)
Mpv17lNP_001389007.1 Mpv17_PMP22 106..165 CDD:461182 13/49 (27%)

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