DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CycA and CYCD1;1

Sequence 1:NP_524030.2 Gene:CycA FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_177178.1 Gene:CYCD1;1 AraportID:AT1G70210 Length:339 Species:Arabidopsis thaliana

Alignment Length:299 Identity:71/300 (24%)
Similarity:134/300 (45%) Gaps:43/300 (14%)


  Fly   199 EVVQYQMDILEYFRESEKKHRPKPLYMRR--QKDISHNMRSILIDWLVEVSEEYKLDTETLYLSV 261
            ||..:..|.:..|.|.|:...|...|:.|  .:.:..:.|...:.|:::|...|.....|.||:|
plant    43 EVDSWPGDSIACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAV 107

  Fly   262 FYLDRFLSQMAVVRSK---LQLVGTAAMYIAAKYEEIYPPEVGEFVFLTDDSYTKAQVL-RMEQV 322
            .|:||||....:..:.   :||:..|.:.:|||.|||..|.:.:|.........:|:.: |||.:
plant   108 NYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELL 172

  Fly   323 ILKILSFDLCTPTAYVFINTYAVLCDMPEKLKYMTLYISE-----LSLMEGETYLQYLPSLMSSA 382
            :|.:|.:.|.:.|.:.||:.:|...| |.. .::..:||.     ||.::..::|:|.||.:::|
plant   173 VLSVLDWRLRSVTPFDFISFFAYKID-PSG-TFLGFFISHATEIILSNIKEASFLEYWPSSIAAA 235

  Fly   383 SVALARHIL-----------GMEMWTPRLEE---ITTYKLEDLKTVVLHLCHTHKTAKELNTQAM 433
            ::....:.|           ..|.|...|.:   :..|:|  :|.:.:.       ...|||..:
plant   236 AILCVANELPSLSSVVNPHESPETWCDGLSKEKIVRCYRL--MKAMAIE-------NNRLNTPKV 291

  Fly   434 REKYNRDTYKKVAMMESVEMSK-DDFDQLCEAYNCKQKE 471
            ..|.      :|::..|..::: .|......:..||:::
plant   292 IAKL------RVSVRASSTLTRPSDESSFSSSSPCKRRK 324

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CycANP_524030.2 Cyclin_N 206..332 CDD:278560 38/132 (29%)
Cyclin_C 334..450 CDD:281044 27/135 (20%)
CYCD1;1NP_177178.1 Cyclin_N 50..182 CDD:278560 38/132 (29%)
Cyclin_C 184..308 CDD:281044 28/141 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR10177
Phylome 00.000 Not matched by this tool.
11.100

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