DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CycA and CYCD3;2

Sequence 1:NP_524030.2 Gene:CycA FlyBaseID:FBgn0000404 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001331659.1 Gene:CYCD3;2 AraportID:AT5G67260 Length:404 Species:Arabidopsis thaliana

Alignment Length:352 Identity:79/353 (22%)
Similarity:140/353 (40%) Gaps:101/353 (29%)


  Fly   197 FLE-----VVQYQ-MDILEYFRESE--------KKHRPKPLYMRRQKD-ISHNMRSILIDWLVEV 246
            |||     ||::| :.:|:.|...:        |::...|.:..:..| ...:.|...:||::.|
plant    42 FLEKSDESVVKFQFLPLLDMFLWDDDEILSLISKENETNPCFGEQILDGFLVSCRKEALDWVLRV 106

  Fly   247 SEEYKLDTETLYLSVFYLDRFLSQMAVVRSK---LQLVGTAAMYIAAKYEEIYPP-----EVGEF 303
            ...|...:.|..|:|.|.|||::.:.:...|   .|||..|::.:|||.|||..|     :|.|.
plant   107 KSHYGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEA 171

  Fly   304 VFLTDDSYTKAQVLRMEQVILKILSFDL--CTPTAYV------FINTYAVLCDMPEKLKYMTLYI 360
            .:|    :....:.|||.:||..|.:.:  .||.::.      |.:.:....|...|.:.:.   
plant   172 RYL----FEAKTIQRMELLILSTLQWRMHPVTPISFFDHIIRRFGSKWHQQLDFCRKCERLL--- 229

  Fly   361 SELSLMEGETYLQYLPSLMSSASVALARHILGMEMWTPRLEEITTYKLEDLKTVVLHLCHTHKTA 425
              :|::....:::|.||::::|.:.|.                    .|:||.     |...:..
plant   230 --ISVIADTRFMRYFPSVLATAIMILV--------------------FEELKP-----CDEVEYQ 267

  Fly   426 KELNT--QAMREKYNRDTYK--------KVAMMESVEMSKD----DFDQLC-EAYN--------- 466
            .::.|  :..:||.| :.|:        |..||..|:....    |||... .::|         
plant   268 SQITTLLKVNQEKVN-ECYELLLEHNPSKKRMMNLVDQDSPSGVLDFDDSSNSSWNVSTTASVSS 331

  Fly   467 --------CKQKEDEHQQ---PDINTK 482
                    .|::..:.||   |.||.|
plant   332 SSSSPEPLLKRRRVQEQQMRLPSINRK 358

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CycANP_524030.2 Cyclin_N 206..332 CDD:278560 38/145 (26%)
Cyclin_C 334..450 CDD:281044 22/132 (17%)
CYCD3;2NP_001331659.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR10177
Phylome 00.000 Not matched by this tool.
11.100

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