Protein Alignment CycA and CYCA2;1

DIOPT Version :10

• Sequence 1: NP_524030.2
• Gene: CycA / 39340
• FlyBaseID: FBgn0000404
• Length: 491
• Species: Drosophila melanogaster
• Sequence 2: NP_001332473.1
• Gene: CYCA2;1 / 832610
• AraportID: AT5G25380
• Length: 443
• Species: Arabidopsis thaliana
• Alignment Length: 446
• Identity: 144/446 - (32%)
• Similarity: 216/446 - (48%)
• Gaps: 65/446 - (14%)

  Fly    39 EKNALAPRANFAVLNGNNNVPRPAGKVQVFRDVRNLNVDENVEYGAKK--SNVVPVVEQFKTFSV 101
            :.|....|:....|..:|:..:||.|.:..|..|..|         |:  |:.:.|..| |..:|
plant    23 DNNVRVTRSRAKALGVSNSPSKPAFKHETKRVARPSN---------KRMASDNITVCNQ-KRRAV 77

  Fly   102 YEDNNDTQVAPSGKSLA-SLVDKENHDVKFGAGQKELVDYDLDSTPMSVTDVQSPMSVDRSILGV 165
            .:|..:|        || |::..|.:......|.||....:.|.. :.|...:|.::.|.|.:.:
plant    78 LKDVTNT--------LAESIISTEGNVKACKRGGKETKQIEEDGL-VDVDGEKSKLAEDLSKIRM 133

  Fly   166 IQSSDISVGTETGVSPTGRVKELPPRNDRQRFLEVVQ----------------YQMDILEYFRES 214
            ::|.|.|...:..|...        ..||....:.||                |...|.:....:
plant   134 VESLDASASKQKLVDCA--------EEDRSDVTDCVQIVDIDSGVQDPQFCSLYAASIYDSINVA 190

  Fly   215 EKKHRPKPLYM-RRQKDISHNMRSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMAVVRSKL 278
            |.:.||...|| :.|:||...||.|||||||||||||||.::||||:|..:|||:|...:.:.||
plant   191 ELEQRPSTSYMVQVQRDIDPTMRGILIDWLVEVSEEYKLVSDTLYLTVNLIDRFMSHNYIEKQKL 255

  Fly   279 QLVGTAAMYIAAKYEEIYPPEVGEFVFLTDDSYTKAQVLRMEQVILKILSFDLCTPTAYVFINTY 343
            ||:|...|.||:|||||..|.:.||.|:||::||:.:||.||..:|..|.|.|..||...|:..:
plant   256 QLLGITCMLIASKYEEISAPRLEEFCFITDNTYTRLEVLSMEIKVLNSLHFRLSVPTTKTFLRRF 320

  Fly   344 AVLCDMPEK-----LKYMTLYISELSLMEGETYLQYLPSLMSSASVALARHILGM--EMWTPRLE 401
            .......:|     ::|:..|.:||:|.| .|:|::||||:::::|.|||..|..  ..|...|:
plant   321 IRAAQASDKVPLIEMEYLANYFAELTLTE-YTFLRFLPSLIAASAVFLARWTLDQSNHPWNQTLQ 384

  Fly   402 EITTYKLEDLKTVVLHLCHTHKTAKELNTQ-----AMREKYNRDTYKKVAMMESVE 452
            ..|.|:...||..||.:     ...:|||.     |:..|||:..:|:||.:.|.|
plant   385 HYTRYETSALKNTVLAM-----EELQLNTSGSTLIAIHTKYNQQKFKRVATLTSPE 435

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycA	NP_524030.2	CYCLIN_CCNA_rpt1	202..329	CDD:410208	64/143 (45%)
		Cyclin_C	334..450	CDD:397230	39/127 (31%)
CYCA2;1	NP_001332473.1	CYCLIN_AtCycA_like_rpt1	172..307	CDD:410265	63/134 (47%)
		CYCLIN_AtCycA-like_rpt2	311..425	CDD:410210	36/119 (30%)