Protein Alignment CycA and CYCD3;1

DIOPT Version :10

• Sequence 1: NP_524030.2
• Gene: CycA / 39340
• FlyBaseID: FBgn0000404
• Length: 491
• Species: Drosophila melanogaster
• Sequence 2: NP_195142.1
• Gene: CYCD3;1 / 829564
• AraportID: AT4G34160
• Length: 376
• Species: Arabidopsis thaliana
• Alignment Length: 286
• Identity: 66/286 - (23%)
• Similarity: 117/286 - (40%)
• Gaps: 64/286 - (22%)

  Fly   236 RSILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMAVVRSK---LQLVGTAAMYIAAKYEEIYP 297
            |...:.|::.|:..|...|....|::.|||:|:...::.|.|   ||||..|.:.:|||.||...
plant    87 RKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQV 151

  Fly   298 PEVGEF-VFLTDDSYTKAQVLRMEQVILKILSF--DLCTPTAYV----------------FINTY 343
            |.:.:| |..|...:....:.|||.:||..|.:  .|.||.::|                |:|..
plant   152 PLLLDFQVEETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGLKNNAHWDFLNKC 216

  Fly   344 AVLCDMPEKLKYMTLYISELSLMEGETYLQYLPSLMSSASVALARHILGMEMWTP-----RLEEI 403
            ..|.               ||::....::.||||::::|:  :.|.|..::.:.|     .|..:
plant   217 HRLL---------------LSVISDSRFVGYLPSVVAAAT--MMRIIEQVDPFDPLSYQTNLLGV 264

  Fly   404 TTYKLEDLKT---VVLHLCHTHKTAKELNTQAMREKYNRDTYKKVAM---------MESVEMSKD 456
            .....|.:||   ::|.| ...:...::..|:.:::.:.|:...:..         ..|.|.|.|
plant   265 LNLTKEKVKTCYDLILQL-PVDRIGLQIQIQSSKKRKSHDSSSSLNSPSCVIDANPFNSDESSND 328

  Fly   457 DFDQLCEAYNCK---QKEDEHQQPDI 479
            .:    .|.:|.   ......|||.:
plant   329 SW----SASSCNPPTSSSSPQQQPPL 350

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycA	NP_524030.2	CYCLIN_CCNA_rpt1	202..329	CDD:410208	32/96 (33%)
		Cyclin_C	334..450	CDD:397230	23/148 (16%)
CYCD3;1	NP_195142.1	CYCLIN_AtCycD-like_rpt1	86..184	CDD:410246	32/96 (33%)
		CYCLIN_AtCycD-like_rpt2	189..279	CDD:410247	20/106 (19%)