DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnai2 and dync1i2b

DIOPT Version :10

Sequence 1:NP_001261723.1 Gene:Dnai2 / 39318 FlyBaseID:FBgn0036195 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_009300385.2 Gene:dync1i2b / 561612 ZFINID:ZDB-GENE-090121-1 Length:645 Species:Danio rerio


Alignment Length:567 Identity:120/567 - (21%)
Similarity:216/567 - (38%) Gaps:119/567 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GARVHFEDKDEVVFTENSNPELVKSYILKNPVDRVTQ--YAGQTSLSVANTERATYKSTGITHNE 75
            |.|....|.|......:|:.:|.:. .||..:.:|||  :..:..:|.:   :.|...|...|.|
Zfish   120 GPRTLHWDSDPSTLLLHSDSQLGRG-PLKLGMSKVTQVDFPPKEMVSYS---KETQTPTQTHHKE 180

  Fly    76 G-GWPKDINMHDPEQTVRYKRKIEKDENYITQVMNLTKPMEHYIHQNNAVNIYENYFENLDPAPL 139
            . ...:|:.:..|....:.::..:|:|:..:......:..:..:|....|..:::      .:.:
Zfish   181 DEEEEEDLAVMQPVMEPQEEKDSQKEEDEASPHELTEEEKQQILHSEEFVTFFDH------SSRI 239

  Fly   140 PEPCKSRTVNVYRDPN-------------PIKVPV----------KH-----LSWSPDGGIKMAV 176
            .|...|..|:|:.|.:             ..|:.:          ||     |.|||.....:..
Zfish   240 MERALSEQVDVFFDYSGRDLQDKEGESQAGAKLSLNRQFADERWSKHRVVTCLDWSPQYPELLVA 304

  Fly   177 SHCDMRFQGDKSNQKCNSYIWEVENPNEP----------FLTLEPKVPCVC------LEYNQKDP 225
            |:|        ||:         |.|:||          :....|:....|      ..:.|..|
Zfish   305 SYC--------SNE---------EAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSAAFAQFHP 352

  Fly   226 TSLVSGMYNGQVAAWDTRHGK------LPVMISEREVCHRDPVNSVLWNNSKSGTEFFSGGSDGQ 284
            ..:|.|.|:||:..||.|..|      .|:..|    .|..||..|....:::.....|..:||:
Zfish   353 NLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAS----AHTHPVYCVNVVGTQNAHNLISISTDGK 413

  Fly   285 VLWWDTRKLTEPLDRLLMDPVKSDDQDL----SRSYGISVLEYETTIPTRFMAGTEMGMLFSCNR 345
            :..|....|:.|.|.|          :|    |:|..::.:.:.......|:.|:|.|.:::..|
Zfish   414 MCSWSLDMLSTPQDSL----------ELVFKQSKSVAVTSMSFPLGDVNNFVVGSEDGSVYTACR 468

  Fly   346 KGKTPTEKIQIRMMC--HLGPVYAITRNPA-----FVKNFLTVG-DWCARIWSEDCRESSIIWT- 401
            .|    .|..|..|.  |.||:..:..:.|     |...|:|.. ||..::|.  .:.:..::: 
Zfish   469 HG----SKAGISEMFEGHHGPITGLDCHTAAGPVDFSHLFVTSSFDWTVKLWG--TKNNKPLYSF 527

  Fly   402 KSSSSMLTDGAWSYTKVSQFFITRMDGV--LDTWDLLQQQNEPVLTVKVCDEP-LYCVRTNENGK 463
            :.:|..:.|..||.|..:.|  ..:|||  ||.|:|..:...|..:|.|...| |..||...:|:
Zfish   528 EDNSDYVYDVMWSPTHPALF--ACVDGVGHLDLWNLNNETEVPTASVTVEGNPALNRVRWAHSGR 590

  Fly   464 FVSCGSQLGATFLVEVSDNMVMSAKND-KPLLTAMFERENRREKILE 509
            .|:.|...|...:.:|.:.:.:..::: ...:..:.|....||.:.|
Zfish   591 EVAVGDSEGQLHIYDVGEQISVPRQDEWTRFVRTLTEINENREDVEE 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnai2NP_001261723.1 WD40 212..469 CDD:475233 70/284 (25%)
WD40 repeat 215..254 CDD:293791 14/50 (28%)
WD40 repeat 262..304 CDD:293791 10/41 (24%)
WD40 repeat 318..355 CDD:293791 7/36 (19%)
WD40 repeat 365..401 CDD:293791 7/41 (17%)
WD40 repeat 408..433 CDD:293791 10/26 (38%)
WD40 repeat 162..208 CDD:293791 14/60 (23%)
dync1i2bXP_009300385.2 None

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